BLASTX nr result

ID: Coptis25_contig00040460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040460
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513901.1| conserved hypothetical protein [Ricinus comm...   140   1e-32
emb|CBI19144.3| unnamed protein product [Vitis vinifera]              130   1e-28
emb|CBI25532.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002271799.2| PREDICTED: uncharacterized protein LOC100246...    93   3e-17
ref|XP_002269635.2| PREDICTED: uncharacterized protein LOC100251...    92   3e-17

>ref|XP_002513901.1| conserved hypothetical protein [Ricinus communis]
           gi|223546987|gb|EEF48484.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  140 bits (354), Expect(2) = 1e-32
 Identities = 67/127 (52%), Positives = 95/127 (74%)
 Frame = -2

Query: 383 RNSDLILSFLRDSGFSKAHVEKVVEKAPAVLTLNFENYVKPKIKMFQDLSFTQIDIVDII 204
           +N+DL+LSFL +SGFSK H+E VV+K P VL+  FE  +KPKIK+FQDL F  IDI DI+
Sbjct: 78  QNADLVLSFLTESGFSKIHIENVVQKVPQVLSSKFETSIKPKIKIFQDLGFESIDIADIV 137

Query: 203 ATNPQILTRSMENYLLPSLVMLKDMLGGNENVCKLLKMSCRFLNYRFEKTLVPNIELMTS 24
           + +P +LTRS +N L PSL++LK++LG N  V  LLK+S  FL +  E+ ++PNI+ + S
Sbjct: 138 SADPWVLTRSADNRLGPSLLVLKNVLGTNAGVVTLLKLSGWFLKHDLERVMMPNIDYLKS 197

Query: 23  CGMSKTR 3
           CG+S ++
Sbjct: 198 CGISSSQ 204



 Score = 23.9 bits (50), Expect(2) = 1e-32
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 439 KVSVYDYLVNQHGFS 395
           KV+++DYL+N   FS
Sbjct: 45  KVTIFDYLINHQQFS 59


>emb|CBI19144.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/125 (51%), Positives = 89/125 (71%)
 Frame = -2

Query: 377 SDLILSFLRDSGFSKAHVEKVVEKAPAVLTLNFENYVKPKIKMFQDLSFTQIDIVDIIAT 198
           SD IL+FL++SGFS+ H+EK V++ P VL+ N +  +KPKIK+FQDL  T  DI  II+ 
Sbjct: 82  SDSILAFLKESGFSQTHLEKTVKRVPRVLSANLDKTIKPKIKIFQDLGCTPTDIAYIISQ 141

Query: 197 NPQILTRSMENYLLPSLVMLKDMLGGNENVCKLLKMSCRFLNYRFEKTLVPNIELMTSCG 18
           +P IL RS  N L+PS+V L+ ++G N +V K+LK+  RFL +   KTL PNIE M SCG
Sbjct: 142 DPWILNRSANNGLMPSIVALQSVMGSNSDVSKVLKICARFLKHDLGKTLKPNIEFMKSCG 201

Query: 17  MSKTR 3
           +S ++
Sbjct: 202 ISTSQ 206


>emb|CBI25532.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/115 (51%), Positives = 80/115 (69%)
 Frame = -2

Query: 347 SGFSKAHVEKVVEKAPAVLTLNFENYVKPKIKMFQDLSFTQIDIVDIIATNPQILTRSME 168
           +GFS+ H+EK V++ P VL+ N +  +KPKIK+FQDL  T  DI  II+ +P IL RS  
Sbjct: 488 NGFSQTHLEKTVKRVPRVLSANLDKTIKPKIKIFQDLGCTPTDIAYIISQDPWILNRSAN 547

Query: 167 NYLLPSLVMLKDMLGGNENVCKLLKMSCRFLNYRFEKTLVPNIELMTSCGMSKTR 3
           N LLPS+V L+ ++G N +V K+LK+  RFL +   KTL PNIE M SCG+S T+
Sbjct: 548 NGLLPSIVALQSVMGSNSDVSKVLKICARFLKHDLGKTLKPNIEFMKSCGISTTQ 602


>ref|XP_002271799.2| PREDICTED: uncharacterized protein LOC100246295 [Vitis vinifera]
          Length = 387

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/129 (34%), Positives = 78/129 (60%)
 Frame = -2

Query: 401 ILFNDSRNSDLILSFLRDSGFSKAHVEKVVEKAPAVLTLNFENYVKPKIKMFQDLSFTQI 222
           I F + +N D +L+ LR+SG +  H+ K+V K P++L +N E  + PK++ F+ + F+  
Sbjct: 70  IHFENPKNPDSVLALLRNSGCTNTHITKIVTKFPSLLLVNPEKTLLPKLEFFRSIGFSGA 129

Query: 221 DIVDIIATNPQILTRSMENYLLPSLVMLKDMLGGNENVCKLLKMSCRFLNYRFEKTLVPN 42
            +  I+++ P IL+RS+EN L+P    LK +   NE+  K+LK SC   +   E+T+  N
Sbjct: 130 HLASILSSKPSILSRSLENNLIPKYNFLKSVHISNEDAMKVLKRSCWSSSGNLEETIATN 189

Query: 41  IELMTSCGM 15
           I ++   G+
Sbjct: 190 IAVLREIGV 198


>ref|XP_002269635.2| PREDICTED: uncharacterized protein LOC100251083, partial [Vitis
           vinifera]
          Length = 375

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/129 (34%), Positives = 75/129 (58%)
 Frame = -2

Query: 401 ILFNDSRNSDLILSFLRDSGFSKAHVEKVVEKAPAVLTLNFENYVKPKIKMFQDLSFTQI 222
           + F     +D +L+ LR+ G +  H+ K+V + P +LT N E  + PK++ F+ + F+  
Sbjct: 72  VQFETPERADSVLALLRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGP 131

Query: 221 DIVDIIATNPQILTRSMENYLLPSLVMLKDMLGGNENVCKLLKMSCRFLNYRFEKTLVPN 42
           D+  I+A +PQIL RS+EN+++PS   LK ++  NEN+ + L  S           +VPN
Sbjct: 132 DLASIVAASPQILRRSLENHVIPSYNFLKSVVMVNENIVRALNKSYWLNGQSLPNIIVPN 191

Query: 41  IELMTSCGM 15
           IE++   G+
Sbjct: 192 IEILKDIGV 200


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