BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040436
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    62   4e-08
emb|CAN65498.1| hypothetical protein VITISV_028324 [Vitis vinifera]    60   1e-07
emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]    59   3e-07
emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera]    59   4e-07
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]    58   9e-07

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/69 (39%), Positives = 39/69 (56%)
 Frame = +3

Query: 213 WHKKILDTHIHPCASSLAWKLLQKTVPTDDRIMKSGIKLVSRCHFCHHEEESVQHILWDY 392
           W K + +++I P  S + W+LL   +PTD+ + K G  +VS C FC    ES QHI ++ 
Sbjct: 36  WDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFEC 95

Query: 393 SKTEELWVW 419
             T  LW W
Sbjct: 96  HVTSRLWDW 104


>emb|CAN65498.1| hypothetical protein VITISV_028324 [Vitis vinifera]
          Length = 572

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
 Frame = +3

Query: 75  FNRLGIDLSRLHQPSGEDLRI*KPETDSTFSIQSAFGTVRKNNKNSWHKKILDTHIHPCA 254
           F RLG+   R+ +  GED  + K E   TF + S + +++++N   + +K +     P  
Sbjct: 359 FPRLGVGGVRVQE--GEDFLVWKIERKGTFKVNSYYRSLKEDNSPLFPEKEVWGSYAPLR 416

Query: 255 SSL-AWKLLQKTVPTDDRIMKSGIKLVSRCHFCHHEEESVQHILWDYSKTEELW 413
           +   AW+ +   + T D +M+ G  + +RC+ C   EE+  HIL    KT +LW
Sbjct: 417 TRFFAWEAVWGKISTIDMLMRRGWSMANRCNLCKENEETTNHILIHCGKTRDLW 470


>emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]
          Length = 489

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
 Frame = +3

Query: 69  ELFNRLGIDLSRLHQPSGEDLRI*KPETDSTFSIQSAFGTVRKNNKNSWHKKILDTHIHP 248
           E  NR    +S +    GED  + K E   TF I+S + +++++N   +  K +     P
Sbjct: 164 EEVNRFLGYISAVKVQEGEDFLVWKIERKGTFKIKSYYRSLKEDNSPLFPAKEVWGSYAP 223

Query: 249 CASSL-AWKLLQKTVPTDDRIMKSGIKLVSRCHFCHHEEESVQHILWDYSKTEELW 413
             +   AW+ +   + T D +M+ G  +V+RC+ C   EE+  HIL    KT +LW
Sbjct: 224 LRTRFFAWEAVWGKISTVDMLMRRGWSMVNRCNLCKENEETANHILIHCGKTRDLW 279


>emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera]
          Length = 1821

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = +3

Query: 69   ELFNRLGIDLSRLHQPSGEDLRI*KPETDSTFSIQSAFGTVRKNNKNSWHKKILDTHIHP 248
            E  NR    +S +    GED  + K E   TF + S + +++++N   + +K +     P
Sbjct: 1604 EEVNRFLGYISAVRVQEGEDFLVWKIERKGTFKVNSYYRSLKEDNSPLFPEKEVWGSYAP 1663

Query: 249  CASSL-AWKLLQKTVPTDDRIMKSGIKLVSRCHFCHHEEESVQHILWDYSKTEELW 413
              +   AW+ +   + T D +M+ G  + +RC+ C   EE+  HIL    KT +LW
Sbjct: 1664 LRTCFFAWEAVWSKISTIDMLMRRGWSMANRCNLCKENEETANHILIHCGKTRDLW 1719


>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
 Frame = +3

Query: 96  LSRLHQPSGEDLRI*KPETDSTFSIQSAFGTVR-KNNKNSWHKKILDTHIHPCASSLAWK 272
           +S +    GED  I K E    FS++S + +++ +NN     K++  +         AW+
Sbjct: 641 ISAIKVQEGEDSLIWKIERKGKFSVKSYYRSLKVENNPLFPAKEVWGSRAPLRTRFFAWE 700

Query: 273 LLQKTVPTDDRIMKSGIKLVSRCHFCHHEEESVQHILWDYSKTEELWVWAAGMF 434
            +   + T D +M+ G  +V+RC  C   EES  HIL    KT ELW      F
Sbjct: 701 AMWGKISTVDMLMRRGWSMVNRCVLCKENEESTDHILIHCGKTRELWTVVLSSF 754