BLASTX nr result

ID: Coptis25_contig00040431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040431
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    62   6e-08
gb|ACU01865.1| otubain [Glycine max]                                   59   5e-07

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = +1

Query: 34  SKSGTDEFMKMPEAGYLAASKYHTAVVFFSKAKSVTFLPLRSA-IPKNGPNVISIGLV-E 207
           S +  D +M MP+ G++ AS+Y+  +V+ S    +TFLPLRSA  P     V+SIG + +
Sbjct: 651 SPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRRVLSIGFIND 710

Query: 208 NKMLKLKLKTNYPMPEIAKLWFDYHYP 288
           N  +++ + T  PMP +A  W    YP
Sbjct: 711 NHFVEILMTTGAPMPPVANSWSKSCYP 737


>gb|ACU01865.1| otubain [Glycine max]
          Length = 341

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
 Frame = +1

Query: 22  VENLSKSGTDEFMKMPEAGYLAASKYHTAVVFFSKAKSVTFLPLRSAIPKNGP--NVISI 195
           V+ L+K  TD+++ +   GY+ AS+Y+  VV  SK +S+TF PLRS    N     +I I
Sbjct: 231 VDGLTKVTTDKWIDITNMGYVIASRYNVIVVSLSKQQSMTFFPLRSQPLANSSLHRIICI 290

Query: 196 GLV-ENKMLKLKLKTNYPMPEIAKLWFDYHYP 288
             V +N  +++ LK   P+P +A LW    +P
Sbjct: 291 SHVYDNHFVEVYLKERCPLPSVALLWSSNCHP 322


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