BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040424
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   105   5e-21
ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   102   3e-20
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   102   3e-20

>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 68/79 (86%)
 Frame = -2

Query: 245 RRCFSMGSFEYVMDESSSLQVSIKPPVRKQTSKKPTIPLTPGHRTAMSECDCHSSREGFK 66
           RRC+SMGSFEYV+DE+SSLQV ++ P++KQ+SKKPT+PLTPGHR AMSECDC S RE F 
Sbjct: 292 RRCYSMGSFEYVLDENSSLQVPVRTPMKKQSSKKPTLPLTPGHRPAMSECDCESRRE-FD 350

Query: 65  GFDALRSIEIHSGDSIGSA 9
           GF++L+S+E++   SI S+
Sbjct: 351 GFESLKSVEVNGTASIVSS 369


>ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|222855359|gb|EEE92906.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/76 (64%), Positives = 63/76 (82%)
 Frame = -2

Query: 245 RRCFSMGSFEYVMDESSSLQVSIKPPVRKQTSKKPTIPLTPGHRTAMSECDCHSSREGFK 66
           RRC+SMGSFEYV+DE+SSLQV I+ P+RKQ+S K T+PLTPGH+ AMSECDC S RE F 
Sbjct: 287 RRCYSMGSFEYVLDENSSLQVPIRTPMRKQSSMKTTLPLTPGHKLAMSECDCESRRE-FD 345

Query: 65  GFDALRSIEIHSGDSI 18
           GF+ L+S++++   SI
Sbjct: 346 GFEGLKSVQVNGSASI 361


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/75 (65%), Positives = 62/75 (82%)
 Frame = -2

Query: 245 RRCFSMGSFEYVMDESSSLQVSIKPPVRKQTSKKPTIPLTPGHRTAMSECDCHSSREGFK 66
           RRCFSMGSFEYVMD+++SLQV+I+ P++KQ+SKKP+IPLTPGHR AMSECDC S RE   
Sbjct: 292 RRCFSMGSFEYVMDDNTSLQVAIRTPMKKQSSKKPSIPLTPGHRPAMSECDCESRREFNG 351

Query: 65  GFDALRSIEIHSGDS 21
            F+ +RS+E +   S
Sbjct: 352 LFEGIRSMEANGNVS 366


>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/75 (65%), Positives = 60/75 (80%)
 Frame = -2

Query: 245 RRCFSMGSFEYVMDESSSLQVSIKPPVRKQTSKKPTIPLTPGHRTAMSECDCHSSREGFK 66
           RRCFSMGSFEYVMDE+SSLQV I+ PV+K ++K+ ++PLTPG R AMSECDC S RE F 
Sbjct: 333 RRCFSMGSFEYVMDENSSLQVPIRTPVKKTSTKRRSLPLTPGGRMAMSECDCESRRE-FS 391

Query: 65  GFDALRSIEIHSGDS 21
           GFDA++  + H G S
Sbjct: 392 GFDAVKGGDTHMGSS 406


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/75 (65%), Positives = 60/75 (80%)
 Frame = -2

Query: 245 RRCFSMGSFEYVMDESSSLQVSIKPPVRKQTSKKPTIPLTPGHRTAMSECDCHSSREGFK 66
           RRCFSMGSFEYVMDE+SSLQV I+ PV+K ++K+ ++PLTPG R AMSECDC S RE F 
Sbjct: 333 RRCFSMGSFEYVMDENSSLQVPIRTPVKKTSTKRRSLPLTPGGRMAMSECDCESRRE-FS 391

Query: 65  GFDALRSIEIHSGDS 21
           GFDA++  + H G S
Sbjct: 392 GFDAVKGGDTHMGSS 406