BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040418
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...    74   2e-11
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
emb|CBI27232.3| unnamed protein product [Vitis vinifera]               67   1e-09

>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = -3

Query: 309 QLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 145
           +L+KR+R   ASKIVEVMLQK+ SPKASTW RVV +LC+ +K+QA I+ C SKL+
Sbjct: 598 RLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKCWSKLY 652


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = -3

Query: 309 QLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 145
           +L+KR+R+  ASKIVEVMLQK   PK STW RVV+DLC  +KVQA I+ C S L+
Sbjct: 586 RLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = -3

Query: 309 QLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 145
           +L+KR+R+  ASKIVEVMLQK   PK STW RVV++LC+ +KVQA I+ C S L+
Sbjct: 616 RLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCWSILY 670


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -3

Query: 309 QLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 145
           +L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C S LF
Sbjct: 589 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 643


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -3

Query: 309 QLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 145
           +L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C S LF
Sbjct: 605 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 659