BLASTX nr result

ID: Coptis25_contig00040404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040404
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612511.1| Kinase-like protein [Medicago truncatula] gi...    96   4e-18
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...    90   2e-16
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]    90   2e-16
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...    89   3e-16
emb|CBI25221.3| unnamed protein product [Vitis vinifera]               89   3e-16

>ref|XP_003612511.1| Kinase-like protein [Medicago truncatula]
           gi|355513846|gb|AES95469.1| Kinase-like protein
           [Medicago truncatula]
          Length = 992

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/86 (54%), Positives = 61/86 (70%)
 Frame = -2

Query: 261 FGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGN 82
           FGG LP+ + NF++ LS LY   NQ+SG IP+EI NL +LI   + NN F G+IP+ IG 
Sbjct: 327 FGGSLPSFIGNFTTQLSRLYFASNQISGKIPLEIGNLNSLILLRMKNNYFEGTIPSTIGK 386

Query: 81  LQKLGMLYLYGNRLSEYIPSSIRNMS 4
            QK+ +L LYGN+LS  IPSSI N+S
Sbjct: 387 FQKIQVLDLYGNKLSGEIPSSIGNLS 412



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/83 (36%), Positives = 50/83 (60%)
 Frame = -2

Query: 255 GLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGNLQ 76
           G +P+ V + SS+ + L++  N LSG++P E+  LQN++  D++ N  +G IP  +G   
Sbjct: 450 GDIPSEVLSLSSLTTGLFLSQNFLSGSLPDEVGQLQNIVRIDVSKNWLSGEIPRTLGECL 509

Query: 75  KLGMLYLYGNRLSEYIPSSIRNM 7
            L  L L GN  +  IPSS+ ++
Sbjct: 510 SLEYLILTGNSFNGSIPSSLESL 532



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%)
 Frame = -2

Query: 264 QFGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIG 85
           QF G LP+++ N    L    I  NQ+SG IPI +EN   L   D++NN+F G++P+ +G
Sbjct: 224 QFDGSLPSNMFNTLPYLKVFAISGNQISGLIPISVENASTLAELDISNNLFVGNVPS-LG 282

Query: 84  NLQKLGMLYLYGNRLSE 34
            L  L  L L  N L +
Sbjct: 283 RLHYLWGLNLEINNLGD 299


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1040

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = -2

Query: 264 QFGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIG 85
           QFGG+LP S+AN S+ L +L + +NQLSG IP  I NL NL    L NN FTGSIP  IG
Sbjct: 363 QFGGVLPNSIANLSTQLMKLKLDNNQLSGTIPPGIGNLVNLTDLILANNDFTGSIPVLIG 422

Query: 84  NLQKLGMLYLYGNRLSEYIPSSIRNMSQ 1
           NLQ LG + L  N+LS +IPSS+ N+++
Sbjct: 423 NLQMLGRIDLSRNQLSGHIPSSLGNITR 450


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/88 (55%), Positives = 62/88 (70%)
 Frame = -2

Query: 264 QFGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIG 85
           QFGG+LP S+AN S+ L +L + +NQLSG IP  I NL NL    L NN FTGSIP  IG
Sbjct: 394 QFGGVLPNSIANLSTQLMKLKLDNNQLSGTIPPGIGNLVNLTDLILANNDFTGSIPVLIG 453

Query: 84  NLQKLGMLYLYGNRLSEYIPSSIRNMSQ 1
           NLQ LG + L  N+LS +IPSS+ N+++
Sbjct: 454 NLQMLGRIDLSRNQLSGHIPSSLGNITR 481



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/86 (53%), Positives = 55/86 (63%)
 Frame = -2

Query: 261  FGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGN 82
            FGG+LP S+ N S+ L  L    NQ+SGNIP  I NL NLIA D+  N FTGSIP   GN
Sbjct: 1303 FGGVLPNSLGNLSTQLQWLSFAANQISGNIPTGIGNLANLIALDMHKNQFTGSIPTSNGN 1362

Query: 81   LQKLGMLYLYGNRLSEYIPSSIRNMS 4
            L KL  +    N+LS  IPSSI N++
Sbjct: 1363 LHKLZEVGFDKNKLSGVIPSSIGNLT 1388



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = -2

Query: 249  LPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGNLQKL 70
            +P  V   SS+   L +  N LSG +P E+ NL+NL+  D++ N  +G IP+ +G+  +L
Sbjct: 1428 IPREVIGLSSLAKSLNLARNSLSGLLPWEVGNLRNLVELDISQNQLSGDIPSSLGSCIRL 1487

Query: 69   GMLYLYGNRLSEYIPSSIRNM 7
              LY+Y N     IP S+  +
Sbjct: 1488 ERLYMYDNSFGGDIPQSLNTL 1508


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
           [Vitis vinifera]
          Length = 1372

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/87 (51%), Positives = 58/87 (66%)
 Frame = -2

Query: 261 FGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGN 82
           FGG+LP S+ N S+ L  L++G+N++ GNIP EI NL NL  FD   N  TG +P  +G 
Sbjct: 678 FGGVLPNSIVNLSTQLQALHLGENKIFGNIPEEIGNLINLTTFDAGQNYLTGVVPTSVGK 737

Query: 81  LQKLGMLYLYGNRLSEYIPSSIRNMSQ 1
           LQKL  L L  NRLS  +PSS+ N+SQ
Sbjct: 738 LQKLVTLRLSWNRLSGLLPSSLGNLSQ 764



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -2

Query: 255 GLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGNLQ 76
           G +P+ +      +  L +  N L G IPIE+ N  NL   DLT N  TG IP  +GN+ 
Sbjct: 432 GTIPSDIGLLRR-MRHLNLSTNSLQGEIPIELTNCSNLETVDLTRNNLTGQIPFRVGNMS 490

Query: 75  -KLGMLYLYGNRLSEYIPSSIRNMS 4
            KL +L L GN L+  IPS++ N+S
Sbjct: 491 TKLLVLRLGGNGLTGVIPSTLGNLS 515



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/84 (41%), Positives = 48/84 (57%)
 Frame = -2

Query: 255 GLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGNLQ 76
           G +P  V N S+ L  L +G N L+G IP  + NL +L    ++ N   GSIP  +G L+
Sbjct: 480 GQIPFRVGNMSTKLLVLRLGGNGLTGVIPSTLGNLSSLQHLSVSFNHLEGSIPHDLGRLK 539

Query: 75  KLGMLYLYGNRLSEYIPSSIRNMS 4
            L +LYL  N LS  IP S+ N+S
Sbjct: 540 SLKILYLSVNNLSGTIPPSLYNLS 563



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/85 (37%), Positives = 47/85 (55%)
 Frame = -2

Query: 261  FGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGN 82
            F G LPA V    + L+EL + DN+LSG IP E+ +   L   D+  N F G+IP    +
Sbjct: 824  FTGSLPADVGQLKN-LNELLVSDNKLSGEIPTELGSCLVLEYLDMARNSFQGNIPLSFSS 882

Query: 81   LQKLGMLYLYGNRLSEYIPSSIRNM 7
            L+ +  L L  N LS  IP+ + ++
Sbjct: 883  LRGIQFLDLSCNNLSGRIPNELEDL 907


>emb|CBI25221.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/87 (51%), Positives = 58/87 (66%)
 Frame = -2

Query: 261 FGGLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGN 82
           FGG+LP S+ N S+ L  L++G+N++ GNIP EI NL NL  FD   N  TG +P  +G 
Sbjct: 222 FGGVLPNSIVNLSTQLQALHLGENKIFGNIPEEIGNLINLTTFDAGQNYLTGVVPTSVGK 281

Query: 81  LQKLGMLYLYGNRLSEYIPSSIRNMSQ 1
           LQKL  L L  NRLS  +PSS+ N+SQ
Sbjct: 282 LQKLVTLRLSWNRLSGLLPSSLGNLSQ 308



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
 Frame = -2

Query: 255 GLLPASVANFSSILSELYIGDNQLSGNIPIEIENLQNLIAFDLTNNIFTGSIPAGIGN-- 82
           G +P+ +      +  L +  N L G IPIE+ N  NL   DLT N  TG IP  +GN  
Sbjct: 115 GTIPSDIGLLRR-MRHLNLSTNSLQGEIPIELTNCSNLETVDLTRNNLTGQIPFRVGNMS 173

Query: 81  --LQKLGMLYLYGNRLSEYIPSSIRN 10
             L  L +LYL  N LS  IP S+ N
Sbjct: 174 TKLLSLKILYLSVNNLSGTIPPSLYN 199


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