BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040399
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   159   2e-37
ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus ...   159   2e-37
emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]   159   2e-37
gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]          158   5e-37
ref|XP_001775251.1| predicted protein [Physcomitrella patens sub...   157   6e-37

>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/90 (85%), Positives = 84/90 (93%)
 Frame = +3

Query: 3   RSRLLGLRAPKLFCALVRGRRALLCLSSKPWLGYIHGGNFLLTPLSYETLEFAASFSSGQ 182
           RSR LGLRAPKLF  +VRGRRA+LCLSS+PWLGYIH G+FLLTPLSYETLEFAASFSS Q
Sbjct: 685 RSRFLGLRAPKLFSVIVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQ 744

Query: 183 CAEGVVAVTGDALRIFTIEQLGETFNETMI 272
           CAEGVVAV GDALR+FTIE+LGETFNET+I
Sbjct: 745 CAEGVVAVAGDALRVFTIERLGETFNETVI 774


>ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
           gi|223525135|gb|EEF27867.1| spliceosomal protein sap,
           putative [Ricinus communis]
          Length = 1214

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/90 (87%), Positives = 83/90 (92%)
 Frame = +3

Query: 3   RSRLLGLRAPKLFCALVRGRRALLCLSSKPWLGYIHGGNFLLTPLSYETLEFAASFSSGQ 182
           RSR LGLRAPKLF  LVRGRRA+LCLSS+PWLGYIH G+FLLTPLSYETLEFAASFSS Q
Sbjct: 686 RSRFLGLRAPKLFSILVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQ 745

Query: 183 CAEGVVAVTGDALRIFTIEQLGETFNETMI 272
           CAEGVVAV GDALRIFTIE+LGETFNET I
Sbjct: 746 CAEGVVAVAGDALRIFTIERLGETFNETAI 775


>emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/90 (85%), Positives = 84/90 (93%)
 Frame = +3

Query: 3   RSRLLGLRAPKLFCALVRGRRALLCLSSKPWLGYIHGGNFLLTPLSYETLEFAASFSSGQ 182
           RSR LGLRAPKLF  +VRGRRA+LCLSS+PWLGYIH G+FLLTPLSYETLEFAASFSS Q
Sbjct: 644 RSRFLGLRAPKLFSVIVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQ 703

Query: 183 CAEGVVAVTGDALRIFTIEQLGETFNETMI 272
           CAEGVVAV GDALR+FTIE+LGETFNET+I
Sbjct: 704 CAEGVVAVAGDALRVFTIERLGETFNETVI 733


>gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
          Length = 1212

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/90 (84%), Positives = 83/90 (92%)
 Frame = +3

Query: 3   RSRLLGLRAPKLFCALVRGRRALLCLSSKPWLGYIHGGNFLLTPLSYETLEFAASFSSGQ 182
           RSR LGLRAPKLF  ++RGRRA+LCLSS+PWLGYIH G+FLLTPLSYETLEFAASFSS Q
Sbjct: 685 RSRFLGLRAPKLFSVIIRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQ 744

Query: 183 CAEGVVAVTGDALRIFTIEQLGETFNETMI 272
           CAEGVVAV GDALR+FTIE+LGETFNET I
Sbjct: 745 CAEGVVAVAGDALRVFTIERLGETFNETAI 774


>ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162673464|gb|EDQ59987.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1201

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/90 (83%), Positives = 85/90 (94%)
 Frame = +3

Query: 3   RSRLLGLRAPKLFCALVRGRRALLCLSSKPWLGYIHGGNFLLTPLSYETLEFAASFSSGQ 182
           R+R LGLRAPKLF ALVRGRRA+LCLSS+PWLGYIH G+FLLTPLSYETLE+AASFSS Q
Sbjct: 673 RTRFLGLRAPKLFSALVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQ 732

Query: 183 CAEGVVAVTGDALRIFTIEQLGETFNETMI 272
           CAEGVVAV GDALR+FTIE+LGETFN+T++
Sbjct: 733 CAEGVVAVAGDALRVFTIERLGETFNQTVV 762