BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040391
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   147   9e-34
ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small ...   145   3e-33
gb|ACL53449.1| unknown [Zea mays]                                     144   7e-33
ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828...   144   7e-33
ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   142   2e-32

>ref|XP_004135478.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Cucumis sativus]
          Length = 476

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/116 (62%), Positives = 89/116 (76%)
 Frame = -2

Query: 352 NLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQLLGAKRRTLSGFSSANSESHVGFFQET 173
           NLS++VGSAVAAKL+G+ GGL AL  MPA N+QLLGAKR+ L+GFS+A S+  VG+ ++T
Sbjct: 211 NLSAIVGSAVAAKLMGTAGGLAALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQT 270

Query: 172 AVVQHTPPPLKHGACKLFAYKSILAARVDLARGDGTGNIGRKYRDEISKKIENWQE 5
            + Q TPPPLK  AC+L + KS LAARVD   GD TG  GR ++DEI KKIE WQE
Sbjct: 271 EIFQSTPPPLKMRACRLISAKSTLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQE 326


>ref|XP_004170207.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear
           ribonucleoprotein Prp31-like [Cucumis sativus]
          Length = 484

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/116 (61%), Positives = 88/116 (75%)
 Frame = -2

Query: 352 NLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQLLGAKRRTLSGFSSANSESHVGFFQET 173
           NLS++VGSAVAAKL+G+ GGL AL  MPA N+QLLGAKR+ L+GFS+A S+  VG+ ++T
Sbjct: 219 NLSAIVGSAVAAKLMGTAGGLAALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQT 278

Query: 172 AVVQHTPPPLKHGACKLFAYKSILAARVDLARGDGTGNIGRKYRDEISKKIENWQE 5
            + Q TPPPLK  AC+L + KS LAARVD   GD TG  GR ++DEI KK E WQE
Sbjct: 279 EIFQSTPPPLKMRACRLISAKSTLAARVDSTMGDPTGKTGRVFKDEILKKXEKWQE 334


>gb|ACL53449.1| unknown [Zea mays]
          Length = 485

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/116 (61%), Positives = 88/116 (75%)
 Frame = -2

Query: 352 NLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQLLGAKRRTLSGFSSANSESHVGFFQET 173
           NLS++VGSAVA+KL+G+ GGL AL  MPA N+QLLGAKR+ L+GFS+A S+  VG+ ++T
Sbjct: 219 NLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQT 278

Query: 172 AVVQHTPPPLKHGACKLFAYKSILAARVDLARGDGTGNIGRKYRDEISKKIENWQE 5
            V Q TPPPL+  AC+L A KS LAAR+D  RGD TG  GR   +EI KKIE WQE
Sbjct: 279 EVFQSTPPPLRTRACRLIAAKSTLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQE 334


>ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828|gb|ACF81498.1| unknown
           [Zea mays] gi|414585941|tpg|DAA36512.1| TPA:
           hypothetical protein ZEAMMB73_628259 [Zea mays]
           gi|414585942|tpg|DAA36513.1| TPA: hypothetical protein
           ZEAMMB73_628259 [Zea mays]
          Length = 485

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/116 (61%), Positives = 88/116 (75%)
 Frame = -2

Query: 352 NLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQLLGAKRRTLSGFSSANSESHVGFFQET 173
           NLS++VGSAVA+KL+G+ GGL AL  MPA N+QLLGAKR+ L+GFS+A S+  VG+ ++T
Sbjct: 219 NLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQT 278

Query: 172 AVVQHTPPPLKHGACKLFAYKSILAARVDLARGDGTGNIGRKYRDEISKKIENWQE 5
            V Q TPPPL+  AC+L A KS LAAR+D  RGD TG  GR   +EI KKIE WQE
Sbjct: 279 EVFQSTPPPLRTRACRLIAAKSTLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQE 334


>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/116 (59%), Positives = 89/116 (76%)
 Frame = -2

Query: 352 NLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQLLGAKRRTLSGFSSANSESHVGFFQET 173
           NLS++VGSAVAAKL+G+ GGL +L  MPA N+QLLGAK++ L+GFS+A S+  VG+ ++T
Sbjct: 221 NLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQT 280

Query: 172 AVVQHTPPPLKHGACKLFAYKSILAARVDLARGDGTGNIGRKYRDEISKKIENWQE 5
            + Q TPP L+  AC+L A KS LAARVD  RGD +G  GR ++DEI KKIE WQE
Sbjct: 281 EIFQTTPPSLRMRACRLLAAKSTLAARVDSIRGDPSGKTGRAFKDEIHKKIEKWQE 336