BLASTX nr result

ID: Coptis25_contig00040377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040377
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525693.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
ref|XP_003554045.1| PREDICTED: uncharacterized protein LOC100808...   123   2e-26
ref|XP_003548462.1| PREDICTED: uncharacterized protein LOC100776...   122   4e-26
ref|XP_003624694.1| hypothetical protein MTR_7g086460 [Medicago ...   120   9e-26
ref|XP_002325434.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002525693.1| conserved hypothetical protein [Ricinus communis]
           gi|223534993|gb|EEF36676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/110 (55%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
 Frame = +3

Query: 15  TTKDICLDDPVIHFTPAFLGGYSAKSVS-----CERVRVVGVSRLNINKYANSFRVTMTP 179
           T K I L +PVI  TP+FL G     VS     CERV+V G SR+    YANSFRVT+ P
Sbjct: 37  TPKGIDLGNPVIDITPSFLNGKFPNRVSRDVLYCERVKVSGHSRIEWGSYANSFRVTLAP 96

Query: 180 SGAIPERLHSQIEVCFHRNASLGLCECAKEEWKSIKKRQWSAFMSPYEDR 329
           S  IPERLHS+I+VCFHRN+SL LC C K+EW++++K  WS+ MSPY+++
Sbjct: 97  SAVIPERLHSKIQVCFHRNSSLALCHCEKDEWRTVQKGMWSSVMSPYDEK 146


>ref|XP_003554045.1| PREDICTED: uncharacterized protein LOC100808605 [Glycine max]
          Length = 504

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/112 (48%), Positives = 80/112 (71%), Gaps = 5/112 (4%)
 Frame = +3

Query: 9   PPTTKDICLDDPVIHFTPAFLGGYSAK-----SVSCERVRVVGVSRLNINKYANSFRVTM 173
           P + K + ++ PV+ F+P+ L G S       ++ CERVRV G+SR+ +  YANS+ VT+
Sbjct: 26  PLSLKGVDIERPVLEFSPSVLPGISGSLGVKDALRCERVRVSGISRVKLGSYANSYHVTL 85

Query: 174 TPSGAIPERLHSQIEVCFHRNASLGLCECAKEEWKSIKKRQWSAFMSPYEDR 329
            PS +IPE+LHS+I+VCFHRN ++G C+C K+EW+ ++K  W+A MSPYE R
Sbjct: 86  APSVSIPEKLHSKIQVCFHRNETVGWCQCEKDEWRGVQKGVWNAVMSPYETR 137


>ref|XP_003548462.1| PREDICTED: uncharacterized protein LOC100776978 [Glycine max]
          Length = 504

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
 Frame = +3

Query: 6   TPPTTKDICLDDPVIHFTPAFLGGYSA---KSVSCERVRVVGVSRLNINKYANSFRVTMT 176
           TP T K + +  PV+ F+P+ +   S     ++ CERV V G SRL +  YANS+RVT+ 
Sbjct: 27  TPLTLKGVDIQKPVLEFSPSGVSSGSQGVRDALRCERVLVSGTSRLKLGSYANSYRVTLA 86

Query: 177 PSGAIPERLHSQIEVCFHRNASLGLCECAKEEWKSIKKRQWSAFMSPYEDR 329
           PS +IPE+LHS+I+VCFHRN +LG C+C K+EW+ ++K  W+A MSPYE R
Sbjct: 87  PSVSIPEKLHSKIQVCFHRNDTLGWCQCEKDEWRGVQKGVWNAVMSPYETR 137


>ref|XP_003624694.1| hypothetical protein MTR_7g086460 [Medicago truncatula]
           gi|87162736|gb|ABD28531.1| protein F1K23.6 - , putative
           [Medicago truncatula] gi|355499709|gb|AES80912.1|
           hypothetical protein MTR_7g086460 [Medicago truncatula]
          Length = 518

 Score =  120 bits (302), Expect = 9e-26
 Identities = 58/113 (51%), Positives = 80/113 (70%), Gaps = 5/113 (4%)
 Frame = +3

Query: 6   TPPTTKDICLDDPVIHFTPAFLGGYS----AKSVS-CERVRVVGVSRLNINKYANSFRVT 170
           +P T K + ++ P +  +P+ L G S    AK++  CERV+V G+SRL +  YANS  VT
Sbjct: 35  SPITLKGVDIERPTLDVSPSLLLGQSNTQGAKNIMRCERVQVSGISRLKLGSYANSLHVT 94

Query: 171 MTPSGAIPERLHSQIEVCFHRNASLGLCECAKEEWKSIKKRQWSAFMSPYEDR 329
           + PS AIPERLH++I+VCFHRN +LG C+C K+EW+ ++K  WSA MSPYE R
Sbjct: 95  LAPSVAIPERLHNKIKVCFHRNNTLGWCQCEKDEWRGVQKGIWSAVMSPYETR 147


>ref|XP_002325434.1| predicted protein [Populus trichocarpa] gi|222862309|gb|EEE99815.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
 Frame = +3

Query: 36  DDPVIHFTPAFLGG--YSAKSVSCERVRVVGVSRLNINKYANSFRVTMTPSGAIPERLHS 209
           ++P +  TP+ L G  +S     CERV+V G SR  ++ YA+SFRVT+ PS  IPERLHS
Sbjct: 11  ENPALDVTPSRLHGHVFSRDVFFCERVKVSGHSRWKLSSYASSFRVTLAPSAVIPERLHS 70

Query: 210 QIEVCFHRNASLGLCECAKEEWKSIKKRQWSAFMSPYEDR 329
           +I+VCFHRNASLGLC+C K++W++++K  W   MSPYE+R
Sbjct: 71  KIQVCFHRNASLGLCQCEKDDWRAVQKGLWRTAMSPYEER 110


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