BLASTX nr result

ID: Coptis25_contig00040361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040361
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39437.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   114   1e-23
ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002518226.1| hypothetical protein RCOM_1749140 [Ricinus c...   105   5e-21
ref|XP_003551811.1| PREDICTED: fanconi-associated nuclease 1 hom...   104   8e-21

>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = +1

Query: 4   SWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDD 183
           SWVYSKVV LGISFLERERRY DA+ LLKRLL   T DGRRGYWTLRLSV+LEH+G L++
Sbjct: 617 SWVYSKVVLLGISFLERERRYDDAVHLLKRLLDGFTCDGRRGYWTLRLSVDLEHLGRLNE 676

Query: 184 SLSVAEEGL 210
           SLSVAE+GL
Sbjct: 677 SLSVAEDGL 685


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = +1

Query: 4   SWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDD 183
           SWVYSKVV LGISFLERERRY DA+ LLKRLL   T DGRRGYWTLRLSV+LEH+G L++
Sbjct: 621 SWVYSKVVLLGISFLERERRYDDAVHLLKRLLDGFTCDGRRGYWTLRLSVDLEHLGRLNE 680

Query: 184 SLSVAEEGL 210
           SLSVAE+GL
Sbjct: 681 SLSVAEDGL 689


>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = +1

Query: 4   SWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDD 183
           SWVYSKVV LG+SFLERERRYKDAI LLKRLL   T DGRRG WTLRLS++LEH+G  ++
Sbjct: 692 SWVYSKVVFLGVSFLERERRYKDAINLLKRLLFNFTCDGRRGNWTLRLSIDLEHMGCPNE 751

Query: 184 SLSVAEEGL 210
           SL VAE+GL
Sbjct: 752 SLLVAEDGL 760


>ref|XP_002518226.1| hypothetical protein RCOM_1749140 [Ricinus communis]
           gi|223542631|gb|EEF44169.1| hypothetical protein
           RCOM_1749140 [Ricinus communis]
          Length = 308

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = +1

Query: 4   SWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDD 183
           SWVYSKVV LG+SF E E RYKDAI LLKRLL+    DGRRGYWTLRLS++LEHIG  ++
Sbjct: 50  SWVYSKVVVLGVSFFEHEHRYKDAINLLKRLLACFPCDGRRGYWTLRLSIDLEHIGCPNE 109

Query: 184 SLSVAEEGL 210
           SLS+AE+GL
Sbjct: 110 SLSIAEDGL 118


>ref|XP_003551811.1| PREDICTED: fanconi-associated nuclease 1 homolog [Glycine max]
          Length = 981

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = +1

Query: 4   SWVYSKVVTLGISFLERERRYKDAIRLLKRLLSRITSDGRRGYWTLRLSVNLEHIGHLDD 183
           SWVYSKVVT+GISFLERE RY DAI LL+ LL+  T D RRGYWTLRLSV+LEH+G++D+
Sbjct: 649 SWVYSKVVTVGISFLEREHRYIDAINLLQWLLNVFTCDVRRGYWTLRLSVDLEHLGYIDE 708

Query: 184 SLSVAEEGL 210
           SL VAE GL
Sbjct: 709 SLQVAENGL 717


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