BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040330
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    80   2e-16
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    85   5e-15
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    76   7e-15
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    75   9e-15
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   3e-14

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 79.7 bits (195), Expect(2) = 2e-16
 Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = +3

Query: 87   AGRLEIIKSVLSSFQGYWSRTFVLPKTIFDKVAKIYNKFLWAGPGMK-KKMHHNNHEVLR 263
            AGRL++IKSVLSS   +W   F LPK    ++ K+++ FLW+GP +  KK      EV +
Sbjct: 955  AGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCK 1014

Query: 264  LAKDQGGLGIVDPRTWNRAVYCGFVFKIANNDESLWVRWTWEYHIRGQMF 413
            L K++GGLG+   +  N       +++I +  +SLWV+W  ++ IR + F
Sbjct: 1015 L-KEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETF 1063



 Score = 30.4 bits (67), Expect(2) = 2e-16
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 4    RLGIKECLPLVQKLTSKISNWKNRILS 84
            R+   + LPLV+K+ ++I++W NR LS
Sbjct: 927  RMTQSDYLPLVEKIRARITSWTNRFLS 953


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/107 (37%), Positives = 59/107 (55%)
 Frame = +3

Query: 87   AGRLEIIKSVLSSFQGYWSRTFVLPKTIFDKVAKIYNKFLWAGPGMKKKMHHNNHEVLRL 266
            AGRL++IKS+LSS Q YW+  F L K +   V K+  KFLW G   + K        ++ 
Sbjct: 793  AGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQR 852

Query: 267  AKDQGGLGIVDPRTWNRAVYCGFVFKIANNDESLWVRWTWEYHIRGQ 407
             K +GG  +++ + WNRA     ++ I    + LWVRW   Y+I+ Q
Sbjct: 853  PKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQ 899


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 75.9 bits (185), Expect(2) = 7e-15
 Identities = 34/106 (32%), Positives = 57/106 (53%)
 Frame = +3

Query: 87   AGRLEIIKSVLSSFQGYWSRTFVLPKTIFDKVAKIYNKFLWAGPGMKKKMHHNNHEVLRL 266
            AGR++++KS+ S+   YW + F LP+ +  K+  I   F+W G     K      + +  
Sbjct: 1000 AGRIQLVKSITSAIAMYWMQCFPLPQFVLRKINDICRSFVWTGKQEISKKSLVAWDTMCR 1059

Query: 267  AKDQGGLGIVDPRTWNRAVYCGFVFKIANNDESLWVRWTWEYHIRG 404
             K QGG+GI++ + WN       ++ I  N E+LWV W   Y+++G
Sbjct: 1060 NKSQGGVGIINLQVWNIVSLMKCLWNICRNSENLWVMWVHTYYLKG 1105



 Score = 29.3 bits (64), Expect(2) = 7e-15
 Identities = 9/27 (33%), Positives = 20/27 (74%)
 Frame = +1

Query: 4    RLGIKECLPLVQKLTSKISNWKNRILS 84
            RL I++ +PL+ K+  ++ +W +++LS
Sbjct: 972  RLTIQQYMPLIDKIVDRVKHWTSKLLS 998


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 75.5 bits (184), Expect(2) = 9e-15
 Identities = 34/106 (32%), Positives = 57/106 (53%)
 Frame = +3

Query: 87   AGRLEIIKSVLSSFQGYWSRTFVLPKTIFDKVAKIYNKFLWAGPGMKKKMHHNNHEVLRL 266
            AGR++++KS+ S+   YW + F LP+ +  K+  I   F+W G     K      + +  
Sbjct: 1117 AGRIQLVKSITSAIAMYWMQCFPLPQFVLRKINAICRSFVWTGKQEISKKSLVAWDTMCR 1176

Query: 267  AKDQGGLGIVDPRTWNRAVYCGFVFKIANNDESLWVRWTWEYHIRG 404
             K QGG+GI++ + WN       ++ I  N E+LWV W   Y+++G
Sbjct: 1177 NKSQGGVGIINLQVWNIVSLMKCLWNICRNSENLWVLWVHTYYLKG 1222



 Score = 29.3 bits (64), Expect(2) = 9e-15
 Identities = 9/27 (33%), Positives = 20/27 (74%)
 Frame = +1

Query: 4    RLGIKECLPLVQKLTSKISNWKNRILS 84
            RL I++ +PL+ K+  ++ +W +++LS
Sbjct: 1089 RLTIQQYMPLIDKIVDRVKHWTSKLLS 1115


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 75.5 bits (184), Expect(2) = 3e-14
 Identities = 37/107 (34%), Positives = 54/107 (50%)
 Frame = +3

Query: 87   AGRLEIIKSVLSSFQGYWSRTFVLPKTIFDKVAKIYNKFLWAGPGMKKKMHHNNHEVLRL 266
            AGRL+++K++L S Q YW + F LPK +   V     KFLW G            + L+ 
Sbjct: 796  AGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQ 855

Query: 267  AKDQGGLGIVDPRTWNRAVYCGFVFKIANNDESLWVRWTWEYHIRGQ 407
             K  GGL + +   WN+A     ++ I    + LWVRW   Y+I+ Q
Sbjct: 856  PKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQ 902



 Score = 27.7 bits (60), Expect(2) = 3e-14
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 4   RLGIKECLPLVQKLTSKISNWKNRILS 84
           +L   +C PL+ K+T++   W   +LS
Sbjct: 768 KLNFSQCKPLIDKITTRAQGWVAHLLS 794