BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040324
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat...    88   9e-16
ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat...    88   9e-16
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...    85   6e-15
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...    85   6e-15
emb|CBI22140.3| unnamed protein product [Vitis vinifera]               85   6e-15

>ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 427

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 39/62 (62%), Positives = 49/62 (79%)
 Frame = +1

Query: 340 SLILGEIAAKHLFEIEPENTGNYTLLANIYASMDRWDDAERVRKIASEKGFRKSPGCSWI 519
           +L +GEIAAKHLFE+EPENTGNY LLAN YA M  W++AE+VR +  E+G +K PG SW+
Sbjct: 364 NLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFPGYSWV 423

Query: 520 *R 525
            R
Sbjct: 424 SR 425


>ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 456

 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 39/62 (62%), Positives = 49/62 (79%)
 Frame = +1

Query: 340 SLILGEIAAKHLFEIEPENTGNYTLLANIYASMDRWDDAERVRKIASEKGFRKSPGCSWI 519
           +L +GEIAAKHLFE+EPENTGNY LLAN YA M  W++AE+VR +  E+G +K PG SW+
Sbjct: 393 NLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFPGYSWV 452

Query: 520 *R 525
            R
Sbjct: 453 SR 454


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = +1

Query: 352 GEIAAKHLFEIEPENTGNYTLLANIYASMDRWDDAERVRKIASEKGFRKSPGCSWI 519
           GEIAA+H FE+EP+ TG  +LL+NIYAS +RWDD +R+RK+  EKGF K PGCSW+
Sbjct: 522 GEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWM 577


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = +1

Query: 352 GEIAAKHLFEIEPENTGNYTLLANIYASMDRWDDAERVRKIASEKGFRKSPGCSWI 519
           GEIAA+H FE+EP+ TG  +LL+NIYAS +RWDD +R+RK+  EKGF K PGCSW+
Sbjct: 522 GEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWM 577


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = +1

Query: 352 GEIAAKHLFEIEPENTGNYTLLANIYASMDRWDDAERVRKIASEKGFRKSPGCSWI 519
           GEIAA+H FE+EP+ TG  +LL+NIYAS +RWDD +R+RK+  EKGF K PGCSW+
Sbjct: 370 GEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCSWM 425