BLASTX nr result
ID: Coptis25_contig00040321
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00040321 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241... 61 8e-08 ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera] gi|297740424|emb|CBI30606.3| unnamed protein product [Vitis vinifera] Length = 142 Score = 61.2 bits (147), Expect = 8e-08 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 10/89 (11%) Frame = -2 Query: 313 DLDTE-------DGSVSLGRIIRIRPGDGD--LYFTNSIHHGECQQVIGRSA-ASDSFRS 164 +LDTE D SV LGR+I IR GDG LYFTN + E ++ R A D R Sbjct: 53 NLDTESTASFFQDHSVPLGRLIGIRSGDGSGGLYFTNRMRFNERERASARGAHPPDPSRG 112 Query: 163 HEGTVCRGVCIPLLQCVIVKISPNRNSSR 77 H + +G+CIPLL ++VK++ +++SSR Sbjct: 113 HSMELSQGICIPLLLGILVKMNRSKSSSR 141 >ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|222870898|gb|EEF08029.1| predicted protein [Populus trichocarpa] Length = 140 Score = 57.8 bits (138), Expect = 9e-07 Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 10/90 (11%) Frame = -2 Query: 313 DLDTE-------DGSVSLGRIIRIRPGDGDLYFTNSIHHGECQQV---IGRSAASDSFRS 164 +LDTE D SV LGR+I IRPG+G LYF +H E +++ R+A+S+ + Sbjct: 51 NLDTESSASFFQDNSVPLGRLIGIRPGNGALYFPRRVHVDEREKIGIRAIRAASSEVSGA 110 Query: 163 HEGTVCRGVCIPLLQCVIVKISPNRNSSRR 74 + +G+CIPLL + K+S +++ SR+ Sbjct: 111 RRADMSQGICIPLLFGTLEKMSRSKSKSRQ 140 >ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|222848082|gb|EEE85629.1| predicted protein [Populus trichocarpa] Length = 140 Score = 57.0 bits (136), Expect = 2e-06 Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 10/90 (11%) Frame = -2 Query: 313 DLDTE-------DGSVSLGRIIRIRPGDGDLYFTNSIHHGECQQVIG---RSAASDSFRS 164 +LDTE D SV LGR+I IRPG+G LYF +H E ++ R+A+S+ + Sbjct: 51 NLDTESTASFFQDKSVPLGRLIGIRPGNGGLYFPRRVHADEQGKIAVRAIRAASSEVSGA 110 Query: 163 HEGTVCRGVCIPLLQCVIVKISPNRNSSRR 74 + G+CIPLL + K+S +++ SR+ Sbjct: 111 RRADMSHGICIPLLAGTLEKMSRSKSKSRQ 140