BLASTX nr result

ID: Coptis25_contig00040321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040321
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241...    61   8e-08
ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002279326.1| PREDICTED: uncharacterized protein LOC100241906 [Vitis vinifera]
           gi|297740424|emb|CBI30606.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
 Frame = -2

Query: 313 DLDTE-------DGSVSLGRIIRIRPGDGD--LYFTNSIHHGECQQVIGRSA-ASDSFRS 164
           +LDTE       D SV LGR+I IR GDG   LYFTN +   E ++   R A   D  R 
Sbjct: 53  NLDTESTASFFQDHSVPLGRLIGIRSGDGSGGLYFTNRMRFNERERASARGAHPPDPSRG 112

Query: 163 HEGTVCRGVCIPLLQCVIVKISPNRNSSR 77
           H   + +G+CIPLL  ++VK++ +++SSR
Sbjct: 113 HSMELSQGICIPLLLGILVKMNRSKSSSR 141


>ref|XP_002329836.1| predicted protein [Populus trichocarpa] gi|222870898|gb|EEF08029.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
 Frame = -2

Query: 313 DLDTE-------DGSVSLGRIIRIRPGDGDLYFTNSIHHGECQQV---IGRSAASDSFRS 164
           +LDTE       D SV LGR+I IRPG+G LYF   +H  E +++     R+A+S+   +
Sbjct: 51  NLDTESSASFFQDNSVPLGRLIGIRPGNGALYFPRRVHVDEREKIGIRAIRAASSEVSGA 110

Query: 163 HEGTVCRGVCIPLLQCVIVKISPNRNSSRR 74
               + +G+CIPLL   + K+S +++ SR+
Sbjct: 111 RRADMSQGICIPLLFGTLEKMSRSKSKSRQ 140


>ref|XP_002305118.1| predicted protein [Populus trichocarpa] gi|222848082|gb|EEE85629.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
 Frame = -2

Query: 313 DLDTE-------DGSVSLGRIIRIRPGDGDLYFTNSIHHGECQQVIG---RSAASDSFRS 164
           +LDTE       D SV LGR+I IRPG+G LYF   +H  E  ++     R+A+S+   +
Sbjct: 51  NLDTESTASFFQDKSVPLGRLIGIRPGNGGLYFPRRVHADEQGKIAVRAIRAASSEVSGA 110

Query: 163 HEGTVCRGVCIPLLQCVIVKISPNRNSSRR 74
               +  G+CIPLL   + K+S +++ SR+
Sbjct: 111 RRADMSHGICIPLLAGTLEKMSRSKSKSRQ 140


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