BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040309
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]                            62   6e-08
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]    57   1e-06
ref|XP_002442215.1| hypothetical protein SORBIDRAFT_08g016444 [S...    57   2e-06
ref|XP_002269530.2| PREDICTED: uncharacterized protein LOC100255...    56   3e-06
emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]    56   3e-06

>gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
          Length = 1470

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = -2

Query: 246 HKQFMDGRPDQFSGLVKSTDAQDWLENIEKHLGPLECSSEYKQKLAVFKLYGDAQRWWTT 67
           H+ FM   P  FS  V   DA DWL+ I K L   +C+   K   A  +L G A  WW  
Sbjct: 36  HRDFMSHHPPTFSHAVDPLDADDWLKVIGKKLDITQCNDREKVLYASGRLEGAASDWWDA 95

Query: 66  -TSAGLNANTITYEQFKEKF 10
            T+A  NA+TIT+++F+E F
Sbjct: 96  FTAAHPNADTITWQEFQENF 115


>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 PDQFSGLVKSTDAQDWLENIEKHLGPLECSSEYKQKLAVFKLYGDAQRWWTTTSAGL-NA 46
           P  FSG    T+A+ W+  +EK  G ++CS E K   A F L  +A  WW  T   L + 
Sbjct: 561 PPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFMLDKEAYHWWRMTRRLLEDQ 620

Query: 45  NTITYEQFKEKFLDK 1
             IT+ QF+E F  K
Sbjct: 621 GPITWRQFREAFYKK 635


>ref|XP_002442215.1| hypothetical protein SORBIDRAFT_08g016444 [Sorghum bicolor]
           gi|241942908|gb|EES16053.1| hypothetical protein
           SORBIDRAFT_08g016444 [Sorghum bicolor]
          Length = 292

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = -2

Query: 240 QFMDGRPDQFSGLVKSTDAQDWLENIEKHLGPLECSSEYKQKLAVFKLYGDAQRWWTTTS 61
           +F+ G P  F+      +A DWL  +EK L   +C    K   A  +L G+AQ WW +  
Sbjct: 54  EFLKGHPPVFTHATDPLEADDWLRAVEKQLNIAQCDDRQKVLFASGQLQGEAQTWWESFE 113

Query: 60  AGL--NANTITYEQFKEKF 10
            G   NA  IT+ +FKE F
Sbjct: 114 YGRPPNALAITWLEFKENF 132


>ref|XP_002269530.2| PREDICTED: uncharacterized protein LOC100255052 [Vitis vinifera]
          Length = 684

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 PDQFSGLVKSTDAQDWLENIEKHLGPLECSSEYKQKLAVFKLYGDAQRWWTTTSAGL-NA 46
           P  FSG    T+ + W+  +EK  G ++CS E K   A F L  +A  WW  T   L + 
Sbjct: 62  PPYFSGATDPTEVEAWILKMEKFFGVIDCSKEQKASYAAFMLDKEADHWWRMTRRLLEDQ 121

Query: 45  NTITYEQFKEKFLDK 1
             IT+ QF+E F  K
Sbjct: 122 GPITWRQFREAFYKK 136


>emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]
          Length = 360

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 PDQFSGLVKSTDAQDWLENIEKHLGPLECSSEYKQKLAVFKLYGDAQRWWTTTSAGL-NA 46
           P  FSG    T+A+ W+  +EK  G ++CS E K   A F L  +   WW  T   L + 
Sbjct: 108 PPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFMLDKETDHWWRMTRRLLEDQ 167

Query: 45  NTITYEQFKEKFLDK 1
             IT+ QF+E F  K
Sbjct: 168 GPITWRQFREAFYKK 182