BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040304
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   211   6e-53
emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]   210   1e-52
emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group]         209   2e-52
gb|AAN01245.1| Putative retroelement [Oryza sativa Japonica Grou...   206   2e-51
gb|ABB47016.1| retrotransposon protein, putative, Ty3-gypsy subc...   206   2e-51

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  211 bits (537), Expect = 6e-53
 Identities = 99/177 (55%), Positives = 138/177 (77%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1    PDIVRETAENVRVIRERIKTAQSRQKSYADRKRKGVEFEVGDFAFLKVSPMRGVMRFGKK 180
            PD+++ET + VRVI+E+IKTAQ RQKSYAD+KR+   FEVG+   LKVSPM+GVMRFGKK
Sbjct: 1345 PDMIQETMDQVRVIQEKIKTAQDRQKSYADQKRRDENFEVGEKVLLKVSPMKGVMRFGKK 1404

Query: 181  GKLSPRFIGPFEIVARVGRVAYQLALPATLSSVHDVFHISMLRKCVKDPTQIVEPVEIEI 360
            GKLSP+FIGP+EI+ARVG+VAY+L LP  L  VH+VFH+S LR+ V D + ++EP  +EI
Sbjct: 1405 GKLSPKFIGPYEILARVGKVAYRLDLPNDLERVHNVFHVSQLRRYVPDASHVLEPENVEI 1464

Query: 361  NDDLTHSVKPITIVDRDMKQLRRRQVNLVKVQW-SEDEKDVTWELEDKVRVAHPELF 528
            ++ L++  KP+ I+DR ++  R + V +VKV W ++  ++ TWE ED +R+ +PELF
Sbjct: 1465 DETLSYEEKPVQILDRKVRSTRNKDVRIVKVLWRNQTTEEATWEAEDAMRLKYPELF 1521


>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
          Length = 596

 Score =  210 bits (534), Expect = 1e-52
 Identities = 103/177 (58%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1   PDIVRETAENVRVIRERIKTAQSRQKSYADRKRKGVEFEVGDFAFLKVSPMRGVMRFGKK 180
           P++V+ T E V +I+ER+KT QSR KSYADR+R+ +EFEVGD  FLKVSPM+ VMRFG+K
Sbjct: 410 PELVQLTVEKVALIKERLKTTQSRHKSYADRRRRDLEFEVGDHVFLKVSPMKYVMRFGRK 469

Query: 181 GKLSPRFIGPFEIVARVGRVAYQLALPATLSSVHDVFHISMLRKCVKDPTQIVEPVEIEI 360
           GKLSPRF+GPFEI+ RVG +AY++ALP +LS VH+VFH+S LRK + DP+ +VE   I+I
Sbjct: 470 GKLSPRFVGPFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIYDPSHVVELEPIQI 529

Query: 361 NDDLTHSVKPITIVDRDMKQLRRRQVNLVKVQWSEDE-KDVTWELEDKVRVAHPELF 528
            +DLT+   P+ IVD   K LR   V LVKVQW+    ++ TWELE+++R  HP+LF
Sbjct: 530 FEDLTYEEVPVQIVDVMNKVLRHAVVKLVKVQWNNHSIREATWELEEEMREKHPQLF 586


>emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group]
          Length = 1092

 Score =  209 bits (533), Expect = 2e-52
 Identities = 95/178 (53%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
 Frame = +1

Query: 1    PDIVRETAENVRVIRERIKTAQSRQKSYADRKRKGVEFEVGDFAFLKVSPMRGVMRFGKK 180
            PDI+RE    VR+IR+ +K AQSRQKSYAD +R+ +EF VGDF +L+V+P+RGV RF  K
Sbjct: 904  PDILREAEAKVRIIRDNLKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQTK 963

Query: 181  GKLSPRFIGPFEIVARVGRVAYQLALPATLSSVHDVFHISMLRKCVKDPTQIVEPVEIEI 360
            GKL+PR++GPF I+AR G VAYQL LPA+L +VHDVFH+S L+KC++ P++  +  +IE+
Sbjct: 964  GKLAPRYVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADSEQIEV 1023

Query: 361  NDDLTHSVKPITIVDRDMKQLRRRQVNLVKVQWSED-EKDVTWELEDKVRVAHPELFA 531
             +DLT++ +P+ I+D   ++ R R +   KVQWS   E++ TWE ED+++ AHP+LFA
Sbjct: 1024 REDLTYAERPVKILDTMERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLFA 1081


>gb|AAN01245.1| Putative retroelement [Oryza sativa Japonica Group]
            gi|31431331|gb|AAP53126.1| retrotransposon protein,
            putative, Ty3-gypsy subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1785

 Score =  206 bits (524), Expect = 2e-51
 Identities = 94/177 (53%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
 Frame = +1

Query: 4    DIVRETAENVRVIRERIKTAQSRQKSYADRKRKGVEFEVGDFAFLKVSPMRGVMRFGKKG 183
            DI+RE    VR+IR+ +K AQSRQKSYAD +R+ +EF V DF +L+V+P+RGV RF  KG
Sbjct: 1598 DILREAEAKVRIIRDNLKVAQSRQKSYADNRRRDLEFAVDDFVYLRVTPLRGVHRFQTKG 1657

Query: 184  KLSPRFIGPFEIVARVGRVAYQLALPATLSSVHDVFHISMLRKCVKDPTQIVEPVEIEIN 363
            KL+PR++GPF I+AR G VAYQL LPA+L +VHDVFH+S L+KC++ P++  +P +IE+ 
Sbjct: 1658 KLAPRYVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADPEQIEVR 1717

Query: 364  DDLTHSVKPITIVDRDMKQLRRRQVNLVKVQWSED-EKDVTWELEDKVRVAHPELFA 531
            +DLT+  +P+ I+D   ++ R R +   KVQWS   E++ TWE ED+++ AHP+LFA
Sbjct: 1718 EDLTYVERPVKILDTMERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLFA 1774


>gb|ABB47016.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1849

 Score =  206 bits (523), Expect = 2e-51
 Identities = 94/177 (53%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
 Frame = +1

Query: 4    DIVRETAENVRVIRERIKTAQSRQKSYADRKRKGVEFEVGDFAFLKVSPMRGVMRFGKKG 183
            DI+RE    VR+IR+ +K AQSRQKSYAD +R+ +EF VGDF +L+V+P+RGV RF  KG
Sbjct: 1662 DILREAEAKVRIIRDNLKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQTKG 1721

Query: 184  KLSPRFIGPFEIVARVGRVAYQLALPATLSSVHDVFHISMLRKCVKDPTQIVEPVEIEIN 363
            KL+PR++GPF I+AR G VAYQL LPA+L +VHDVFH+S L+KC++ P++  +  +IE+ 
Sbjct: 1722 KLAPRYVGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADSEQIEVR 1781

Query: 364  DDLTHSVKPITIVDRDMKQLRRRQVNLVKVQWSED-EKDVTWELEDKVRVAHPELFA 531
            +DLT+  +P+ I+D   ++ R R +   KVQWS   E++ TWE ED+++ AHP+LFA
Sbjct: 1782 EDLTYVERPVKILDTMERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLFA 1838