BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040291
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...    91   1e-16
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]    91   1e-16
gb|AFK37258.1| unknown [Lotus japonicus]                               83   2e-14
gb|AFK40316.1| unknown [Lotus japonicus]                               79   4e-13
ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +2

Query: 2   NQTRESINEFLRCCEKFDLAKAEKINIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 181
           NQTRESINE L  C+K+DLAKAE +NIINIRPAS VEIDPIIE+ EKR+  + +EDL+ M
Sbjct: 54  NQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRM-GEGIEDLIEM 112

Query: 182 IVEVLP 199
           ++ VLP
Sbjct: 113 VITVLP 118


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +2

Query: 2   NQTRESINEFLRCCEKFDLAKAEKINIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 181
           NQTRESINE L  C+K+DLAKAE +NIINIRPAS VEIDPIIE+ EKR+  + +EDL+ M
Sbjct: 75  NQTRESINELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRM-GEGIEDLIEM 133

Query: 182 IVEVLP 199
           ++ VLP
Sbjct: 134 VITVLP 139


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/67 (58%), Positives = 53/67 (79%)
 Frame = +2

Query: 2   NQTRESINEFLRCCEKFDLAKAEKINIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 181
           NQTRESINEF+   +K DLAKAE +NIINIRPA+ VE+ PIIE+CE R  ++EV ++V +
Sbjct: 54  NQTRESINEFMASVKKHDLAKAEVLNIINIRPAAAVEMFPIIEECESRFPDEEVTEIVEL 113

Query: 182 IVEVLPS 202
           + + LP+
Sbjct: 114 VKKTLPA 120


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/67 (56%), Positives = 51/67 (76%)
 Frame = +2

Query: 2   NQTRESINEFLRCCEKFDLAKAEKINIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 181
           NQTRESINEF+   +K DLAKAE +NIINI PA+ VE+ PIIE+CE R  ++EV ++V +
Sbjct: 54  NQTRESINEFMASVKKHDLAKAEVLNIINITPAAAVEMFPIIEECEPRFPDEEVTEIVEL 113

Query: 182 IVEVLPS 202
             + LP+
Sbjct: 114 AKKTLPA 120


>ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|222855719|gb|EEE93266.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
 Frame = +2

Query: 2   NQTRESINEFLRCCEKFDLAKAEKINIINIRPASQVEIDPIIEDCEKRIHNDEVEDLVNM 181
           N TRE INEFL  C+K+DLAKAE +NIINIRP+  VEI  IIE+ + R     +E+LV +
Sbjct: 54  NLTREKINEFLERCKKYDLAKAELLNIINIRPSQTVEIYTIIEEMDSRFEMPIIEELVEL 113

Query: 182 IVEVLP----SSGKTGGTD 226
           + EVLP         GGTD
Sbjct: 114 VEEVLPPPPGQPKAEGGTD 132