BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040250
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]   180   1e-43
emb|CBI30318.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus c...   173   1e-41

>ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
           gi|449500964|ref|XP_004161240.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  182 bits (461), Expect = 3e-44
 Identities = 82/105 (78%), Positives = 98/105 (93%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MYAKCGSV++AR IF+RM+V+NV++WSAMIAAYGYHG G KALELFPMML SG+LPN+IT
Sbjct: 296 MYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRIT 355

Query: 182 FVSLLYACSHAGLVDEGRQFFSSMWRDFNVKPDVKHYTCVVDLLG 316
           FVSLLYACSHAGL++EG++FFSSMW ++ V PDVKHYTC+VDLLG
Sbjct: 356 FVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLG 400



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/78 (32%), Positives = 49/78 (62%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MYA+C  V+ A +IF +M  +++ +W+ MI A    G   ++L  F  M + G++P+K+ 
Sbjct: 195 MYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVA 254

Query: 182 FVSLLYACSHAGLVDEGR 235
            V+++YAC+  G +++ +
Sbjct: 255 LVTVVYACAKLGAMNKAK 272


>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  180 bits (456), Expect = 1e-43
 Identities = 83/105 (79%), Positives = 95/105 (90%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MYAKCG V++AREIF+RM  KNV+SWSAMIAAYGYHG GRKAL+LFPMML SG+LP+KIT
Sbjct: 305 MYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKIT 364

Query: 182 FVSLLYACSHAGLVDEGRQFFSSMWRDFNVKPDVKHYTCVVDLLG 316
             SLLYACSHAGLV+EG +FFSSMW D++V+ DVKHYTCVVDLLG
Sbjct: 365 LASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLG 409



 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/105 (79%), Positives = 95/105 (90%)
 Frame = +2

Query: 2    MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
            M+AKCG V++AREIF+RM  KNV+SWSAMIAAYGYHG GRKAL+LFPMML SG+LPNKIT
Sbjct: 981  MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 1040

Query: 182  FVSLLYACSHAGLVDEGRQFFSSMWRDFNVKPDVKHYTCVVDLLG 316
             VSLLYACSHAGLV+EG +FFS MW D++V+ DVKHYTCVVDLLG
Sbjct: 1041 LVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLG 1085



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 27/78 (34%), Positives = 51/78 (65%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MY KC  ++ AR +F++M+ +++V+W+ MI  Y   G   ++L LF  M + GV+P+K+ 
Sbjct: 204 MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 263

Query: 182 FVSLLYACSHAGLVDEGR 235
            V++++AC+  G + + R
Sbjct: 264 MVTVVFACAKLGAMHKAR 281



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/78 (34%), Positives = 50/78 (64%)
 Frame = +2

Query: 2    MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
            MY KC  ++ AR +F++M  +++V+W+ MI  Y   G   ++L LF  M + GV+P+K+ 
Sbjct: 880  MYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 939

Query: 182  FVSLLYACSHAGLVDEGR 235
             V++++AC+  G + + R
Sbjct: 940  MVTVVFACAKLGAMHKAR 957


>emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/105 (79%), Positives = 95/105 (90%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           M+AKCG V++AREIF+RM  KNV+SWSAMIAAYGYHG GRKAL+LFPMML SG+LPNKIT
Sbjct: 533 MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 592

Query: 182 FVSLLYACSHAGLVDEGRQFFSSMWRDFNVKPDVKHYTCVVDLLG 316
            VSLLYACSHAGLV+EG +FFS MW D++V+ DVKHYTCVVDLLG
Sbjct: 593 LVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLG 637



 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/79 (69%), Positives = 65/79 (82%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MYAKCG V++AREIF+RM  KNV+SWSAMIAAYGYHG GRKAL+LF MML SG+LP+KIT
Sbjct: 303 MYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKIT 362

Query: 182 FVSLLYACSHAGLVDEGRQ 238
             SLLYAC +   + + RQ
Sbjct: 363 LASLLYACINCRNLTQVRQ 381



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 27/78 (34%), Positives = 51/78 (65%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MY KC  ++ AR +F++M+ +++V+W+ MI  Y   G   ++L LF  M + GV+P+K+ 
Sbjct: 202 MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 261

Query: 182 FVSLLYACSHAGLVDEGR 235
            V++++AC+  G + + R
Sbjct: 262 MVTVVFACAKLGAMHKAR 279


>ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/105 (79%), Positives = 95/105 (90%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           M+AKCG V++AREIF+RM  KNV+SWSAMIAAYGYHG GRKAL+LFPMML SG+LPNKIT
Sbjct: 377 MHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT 436

Query: 182 FVSLLYACSHAGLVDEGRQFFSSMWRDFNVKPDVKHYTCVVDLLG 316
            VSLLYACSHAGLV+EG +FFS MW D++V+ DVKHYTCVVDLLG
Sbjct: 437 LVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLG 481



 Score =  120 bits (301), Expect = 1e-25
 Identities = 63/107 (58%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MYAKCG V++AREIF+RM  KNV+SWSAMIAAYGYHG GRKAL+LF MML SG+LP+KIT
Sbjct: 175 MYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKIT 234

Query: 182 FVSLLYACSHAGLVDEGRQFFSSMWRDFNVKPDVKHYTC--VVDLLG 316
             SLLYACS    +  GR     +++ F +  D+ H+ C  +VD+ G
Sbjct: 235 LASLLYACSDLKNLQMGRLIHHIVYK-FGL--DLDHFVCAALVDMYG 278



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 27/78 (34%), Positives = 51/78 (65%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MY KC  ++ AR +F++M+ +++V+W+ MI  Y   G   ++L LF  M + GV+P+K+ 
Sbjct: 74  MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 133

Query: 182 FVSLLYACSHAGLVDEGR 235
            V++++AC+  G + + R
Sbjct: 134 MVTVVFACAKLGAMHKAR 151



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/78 (34%), Positives = 50/78 (64%)
 Frame = +2

Query: 2   MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
           MY KC  ++ AR +F++M  +++V+W+ MI  Y   G   ++L LF  M + GV+P+K+ 
Sbjct: 276 MYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVA 335

Query: 182 FVSLLYACSHAGLVDEGR 235
            V++++AC+  G + + R
Sbjct: 336 MVTVVFACAKLGAMHKAR 353


>ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
            gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130,
            putative [Ricinus communis]
          Length = 1530

 Score =  173 bits (439), Expect = 1e-41
 Identities = 79/105 (75%), Positives = 90/105 (85%)
 Frame = +2

Query: 2    MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
            MYAKCG VD+AREIF+ M  KNV+SWSAMIAAYGYHG G+KALELFPMML SG+LPN IT
Sbjct: 1326 MYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNIT 1385

Query: 182  FVSLLYACSHAGLVDEGRQFFSSMWRDFNVKPDVKHYTCVVDLLG 316
            FVSLLYACSHAGLV++G    S MW  F V+PD+KH+TC+VDLLG
Sbjct: 1386 FVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLG 1430



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/78 (35%), Positives = 50/78 (64%)
 Frame = +2

Query: 2    MYAKCGSVDTAREIFERMRVKNVVSWSAMIAAYGYHGCGRKALELFPMMLDSGVLPNKIT 181
            MYAKC  ++ A+ +F+ M  K++V+W+ MI  Y   G  +++L LF  + + G +P+KI 
Sbjct: 1225 MYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIA 1284

Query: 182  FVSLLYACSHAGLVDEGR 235
             VS++ AC+  G +++ R
Sbjct: 1285 MVSIVNACAKLGAMNKAR 1302