BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040244
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ21664.1| cullin 1-like protein A [Prunus avium]                 127   1e-27
gb|ABR17842.1| unknown [Picea sitchensis]                             127   1e-27
ref|XP_003521545.1| PREDICTED: cullin-1-like [Glycine max]            126   2e-27
ref|XP_003554482.1| PREDICTED: cullin-1-like [Glycine max]            126   2e-27
ref|XP_003550218.1| PREDICTED: cullin-1-like isoform 2 [Glycine ...   125   5e-27

>gb|AFJ21664.1| cullin 1-like protein A [Prunus avium]
          Length = 738

 Score =  127 bits (319), Expect = 1e-27
 Identities = 56/84 (66%), Positives = 68/84 (80%)
 Frame = -2

Query: 257 KKIIEFEEGWGVMEKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQL 78
           +KIIE ++GW  M+KGITKL KILEG PE   NSEEYM LYTT+Y +CTQ+PP+DYSQQL
Sbjct: 3   RKIIELDQGWDYMQKGITKLKKILEGIPEPQFNSEEYMMLYTTIYNMCTQKPPNDYSQQL 62

Query: 77  YDQYNRAFDAYFASIVLPSIQEKH 6
           YD+Y  AF+ Y  S VLPS++EKH
Sbjct: 63  YDKYREAFEEYITSTVLPSLREKH 86


>gb|ABR17842.1| unknown [Picea sitchensis]
          Length = 744

 Score =  127 bits (318), Expect = 1e-27
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = -2

Query: 266 MSTKKIIEFEEGWGVMEKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYS 87
           MS +KIIE E GW  M+KGITKL  ILEG PE  +NSEEYM LYTT+Y +CTQ+PP DYS
Sbjct: 3   MSERKIIELEAGWEFMQKGITKLKNILEGNPEQQINSEEYMMLYTTIYNMCTQKPPQDYS 62

Query: 86  QQLYDQYNRAFDAYFASIVLPSIQEKH 6
           QQLYD+Y  +F+ Y  S+VLP+++EKH
Sbjct: 63  QQLYDRYRESFEEYITSMVLPALREKH 89


>ref|XP_003521545.1| PREDICTED: cullin-1-like [Glycine max]
          Length = 728

 Score =  126 bits (317), Expect = 2e-27
 Identities = 55/84 (65%), Positives = 69/84 (82%)
 Frame = -2

Query: 257 KKIIEFEEGWGVMEKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQL 78
           +KII+F++GW  M+KGITKL KILEG PE P +SEEYM LYTT+Y +CTQ+PP+D+SQQL
Sbjct: 3   RKIIDFDQGWDYMQKGITKLKKILEGAPETPFSSEEYMMLYTTIYNMCTQKPPNDFSQQL 62

Query: 77  YDQYNRAFDAYFASIVLPSIQEKH 6
           YD+Y  AFD Y    VLPS++EKH
Sbjct: 63  YDKYKDAFDEYIKITVLPSLREKH 86


>ref|XP_003554482.1| PREDICTED: cullin-1-like [Glycine max]
          Length = 736

 Score =  126 bits (316), Expect = 2e-27
 Identities = 54/84 (64%), Positives = 70/84 (83%)
 Frame = -2

Query: 257 KKIIEFEEGWGVMEKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYSQQL 78
           +KII+F++GW  M+KGITKL +ILEG PE P +SEEYM LYTT+Y +CTQ+PP+D+SQQL
Sbjct: 3   RKIIDFDQGWDYMQKGITKLKRILEGAPETPFSSEEYMMLYTTIYNMCTQKPPNDFSQQL 62

Query: 77  YDQYNRAFDAYFASIVLPSIQEKH 6
           YD+Y  AFD Y  + VLPS++EKH
Sbjct: 63  YDKYKDAFDEYINTTVLPSLREKH 86


>ref|XP_003550218.1| PREDICTED: cullin-1-like isoform 2 [Glycine max]
          Length = 709

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/87 (62%), Positives = 68/87 (78%)
 Frame = -2

Query: 266 MSTKKIIEFEEGWGVMEKGITKLMKILEGYPELPLNSEEYMQLYTTVYTLCTQRPPHDYS 87
           MS +K I+ E+GW  M+KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYS
Sbjct: 3   MSERKTIDLEQGWDFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYS 62

Query: 86  QQLYDQYNRAFDAYFASIVLPSIQEKH 6
           QQLYD+Y  +F+ Y  S VLPS++EKH
Sbjct: 63  QQLYDKYKESFEEYIVSTVLPSLREKH 89