BLASTX nr result

ID: Coptis25_contig00040241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040241
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617249.1| Rho GTPase-activating protein [Medicago trun...   165   4e-39
ref|XP_004139062.1| PREDICTED: uncharacterized protein LOC101220...   161   4e-38
ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus comm...   160   1e-37
ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_003518483.1| PREDICTED: uncharacterized protein LOC100820...   159   2e-37

>ref|XP_003617249.1| Rho GTPase-activating protein [Medicago truncatula]
           gi|355518584|gb|AET00208.1| Rho GTPase-activating
           protein [Medicago truncatula]
          Length = 920

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/94 (85%), Positives = 87/94 (92%)
 Frame = +2

Query: 2   ETSDDLYEWKTALEHALAEAPSAALVMGHNGIFRNETTDTIESSFHQWRDKRSSKSSVVG 181
           ETS+DL+EWKTALE ALA+APSAALVMGHNGIFRN+TTD+I+ SFHQWRDKR  KS VVG
Sbjct: 156 ETSEDLFEWKTALEQALAQAPSAALVMGHNGIFRNDTTDSIDGSFHQWRDKRPVKSLVVG 215

Query: 182 RPILLALEDIDGGSSFLEKALRFLEKFGTKVEGV 283
           RPILLALEDIDGG SFLEKALRFLEK GTKVEG+
Sbjct: 216 RPILLALEDIDGGPSFLEKALRFLEKHGTKVEGI 249


>ref|XP_004139062.1| PREDICTED: uncharacterized protein LOC101220273 [Cucumis sativus]
          Length = 870

 Score =  161 bits (408), Expect = 4e-38
 Identities = 79/94 (84%), Positives = 85/94 (90%)
 Frame = +2

Query: 2   ETSDDLYEWKTALEHALAEAPSAALVMGHNGIFRNETTDTIESSFHQWRDKRSSKSSVVG 181
           ETSDDL+EWKTALE ALA+APSAALVMGHNGIFR++T D I+SSFH WRDKR  KS VVG
Sbjct: 108 ETSDDLFEWKTALEQALAQAPSAALVMGHNGIFRSDTNDKIDSSFHPWRDKRPVKSLVVG 167

Query: 182 RPILLALEDIDGGSSFLEKALRFLEKFGTKVEGV 283
           RPILLALEDIDGG SFLEKALRFLE FGTKVEG+
Sbjct: 168 RPILLALEDIDGGPSFLEKALRFLETFGTKVEGI 201


>ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus communis]
           gi|223534625|gb|EEF36321.1| Rho GTPase activator,
           putative [Ricinus communis]
          Length = 821

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/94 (84%), Positives = 86/94 (91%)
 Frame = +2

Query: 2   ETSDDLYEWKTALEHALAEAPSAALVMGHNGIFRNETTDTIESSFHQWRDKRSSKSSVVG 181
           ETS+DLYEWKTALEHALA+APSAALVMGHNGIFR++T +  E SFHQWRDKR  KS VVG
Sbjct: 54  ETSEDLYEWKTALEHALAQAPSAALVMGHNGIFRSDTNEA-EGSFHQWRDKRPVKSLVVG 112

Query: 182 RPILLALEDIDGGSSFLEKALRFLEKFGTKVEGV 283
           RPILLALEDIDGG SFLEKALRFLE+FGTKVEG+
Sbjct: 113 RPILLALEDIDGGPSFLEKALRFLERFGTKVEGI 146


>ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|222850410|gb|EEE87957.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/94 (84%), Positives = 84/94 (89%)
 Frame = +2

Query: 2   ETSDDLYEWKTALEHALAEAPSAALVMGHNGIFRNETTDTIESSFHQWRDKRSSKSSVVG 181
           ETS+DLYEWKTALE ALA+APS ALVM HNGIFRN+T + IE SFHQWRDKR  KS VVG
Sbjct: 105 ETSEDLYEWKTALELALAQAPSPALVMRHNGIFRNDTNEAIEGSFHQWRDKRPVKSLVVG 164

Query: 182 RPILLALEDIDGGSSFLEKALRFLEKFGTKVEGV 283
           RPILLALEDIDGG SFLEKALRFLEKFGTKVEG+
Sbjct: 165 RPILLALEDIDGGPSFLEKALRFLEKFGTKVEGI 198


>ref|XP_003518483.1| PREDICTED: uncharacterized protein LOC100820132 [Glycine max]
          Length = 870

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/94 (81%), Positives = 85/94 (90%)
 Frame = +2

Query: 2   ETSDDLYEWKTALEHALAEAPSAALVMGHNGIFRNETTDTIESSFHQWRDKRSSKSSVVG 181
           ETS+DL EWKTALE AL +APSAALVMGHNGIFR++ +D+IE SFHQWRDKR  KS VVG
Sbjct: 108 ETSEDLLEWKTALEQALTQAPSAALVMGHNGIFRSDASDSIEGSFHQWRDKRPIKSLVVG 167

Query: 182 RPILLALEDIDGGSSFLEKALRFLEKFGTKVEGV 283
           RPILLALEDIDGG SFLEKALRFLEK+GTKVEG+
Sbjct: 168 RPILLALEDIDGGPSFLEKALRFLEKYGTKVEGI 201


Top