BLASTX nr result

ID: Coptis25_contig00040188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040188
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...   108   6e-22
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...   107   8e-22
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    91   7e-17
ref|XP_002446952.1| hypothetical protein SORBIDRAFT_06g025760 [S...    84   1e-14
ref|XP_003572955.1| PREDICTED: zinc finger MYM-type protein 1-li...    82   4e-14

>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/81 (61%), Positives = 64/81 (79%)
 Frame = -1

Query: 280 RKTKLKEHVGGPNSAHNIAYRAAQALLNQEQHIETFLHRQSDQVRRDYRIHLTAITDCIR 101
           +K +L  HVGGPNSAHN A+R   AL+NQ+QHIE  +++QSD V+R+YRIHLT   +CIR
Sbjct: 146 KKDRLNVHVGGPNSAHNQAWRKCNALMNQKQHIEVVVNKQSDLVKREYRIHLTGTIECIR 205

Query: 100 FLLRQGLAFRGHDESDESINK 38
            LL+ GLAFRG DES++S NK
Sbjct: 206 LLLKLGLAFRGDDESEDSKNK 226


>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = -1

Query: 280 RKTKLKEHVGGPNSAHNIAYRAAQALLNQEQHIETFLHRQSDQVRRDYRIHLTAITDCIR 101
           +K +L  HVGGPNSAHNIA+R  Q L+NQ QHIE  + +QS QVR  YR  LTA  DCIR
Sbjct: 99  KKERLSSHVGGPNSAHNIAWRKCQDLMNQNQHIEVVISKQSKQVRDLYRRRLTASIDCIR 158

Query: 100 FLLRQGLAFRGHDESDESINK 38
           FLL+QG AFRGHDES  S N+
Sbjct: 159 FLLKQGFAFRGHDESTNSANQ 179


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = -1

Query: 280 RKTKLKEHVG-GPNSAHNIAYRAAQALLNQEQHIETFLHRQSDQVRRDYRIHLTAITDCI 104
           +KT L  HVG GPNSAHNIA++    L+ Q+QHIE  + + S   R  YR  LTA  DCI
Sbjct: 243 KKTTLSSHVGAGPNSAHNIAWKKCGDLMKQDQHIEGLMSKHSQTTRNLYRRRLTASLDCI 302

Query: 103 RFLLRQGLAFRGHDESDESINK 38
           R LL+QGL+FRGHDE  ES N+
Sbjct: 303 RLLLKQGLSFRGHDEKIESSNQ 324


>ref|XP_002446952.1| hypothetical protein SORBIDRAFT_06g025760 [Sorghum bicolor]
           gi|241938135|gb|EES11280.1| hypothetical protein
           SORBIDRAFT_06g025760 [Sorghum bicolor]
          Length = 687

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/81 (51%), Positives = 50/81 (61%)
 Frame = -1

Query: 280 RKTKLKEHVGGPNSAHNIAYRAAQALLNQEQHIETFLHRQSDQVRRDYRIHLTAITDCIR 101
           RK +LK HVG    AH  A +   ALL + QHI+  LHRQS+  +R Y   L    D  R
Sbjct: 120 RKERLKTHVGDVGGAHYNAMKKCDALLQRNQHIDVVLHRQSEAAKRAYFTRLNGSIDTAR 179

Query: 100 FLLRQGLAFRGHDESDESINK 38
            LL+QGL FRGHDES ES+NK
Sbjct: 180 LLLKQGLPFRGHDESKESLNK 200


>ref|XP_003572955.1| PREDICTED: zinc finger MYM-type protein 1-like [Brachypodium
           distachyon]
          Length = 809

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/76 (51%), Positives = 49/76 (64%)
 Frame = -1

Query: 265 KEHVGGPNSAHNIAYRAAQALLNQEQHIETFLHRQSDQVRRDYRIHLTAITDCIRFLLRQ 86
           K+HVGGPNS HNIA    +  +NQ   + + +H  S +    Y+I LTA  DC R+L+ Q
Sbjct: 160 KKHVGGPNSFHNIARGKCEDFINQRSSVSSKIHAYSKESEIAYKIRLTASLDCARYLIAQ 219

Query: 85  GLAFRGHDESDESINK 38
           G AFRGHDES  SINK
Sbjct: 220 GEAFRGHDESSTSINK 235


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