BLASTX nr result

ID: Coptis25_contig00040184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040184
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36982.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002278548.1| PREDICTED: uncharacterized protein LOC100243...   145   4e-33
ref|XP_002320281.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002874950.1| hypothetical protein ARALYDRAFT_490383 [Arab...   140   1e-31
ref|XP_003518704.1| PREDICTED: uncharacterized protein LOC100306...   137   1e-30

>emb|CBI36982.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/87 (81%), Positives = 77/87 (88%)
 Frame = +3

Query: 15  TSKPPEGSLEKTTVSLIALVLFIELSAEMYKAGVPDNIEAYILFALAELIWLNLDGTWLG 194
           +SK P+GSL+KT  SLIALVLFIELSAEMYKAGV DNIEAYILFA+AE IWL LDGT  G
Sbjct: 108 SSKAPKGSLKKTGSSLIALVLFIELSAEMYKAGVADNIEAYILFAVAEFIWLFLDGTRQG 167

Query: 195 FTLACVVGFGCPLAEIPIIKLFHLWYY 275
           F LAC+VG GCPLAEIPI+KLFHLWYY
Sbjct: 168 FALACIVGLGCPLAEIPIMKLFHLWYY 194


>ref|XP_002278548.1| PREDICTED: uncharacterized protein LOC100243451 [Vitis vinifera]
          Length = 270

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/87 (81%), Positives = 77/87 (88%)
 Frame = +3

Query: 15  TSKPPEGSLEKTTVSLIALVLFIELSAEMYKAGVPDNIEAYILFALAELIWLNLDGTWLG 194
           +SK P+GSL+KT  SLIALVLFIELSAEMYKAGV DNIEAYILFA+AE IWL LDGT  G
Sbjct: 134 SSKAPKGSLKKTGSSLIALVLFIELSAEMYKAGVADNIEAYILFAVAEFIWLFLDGTRQG 193

Query: 195 FTLACVVGFGCPLAEIPIIKLFHLWYY 275
           F LAC+VG GCPLAEIPI+KLFHLWYY
Sbjct: 194 FALACIVGLGCPLAEIPIMKLFHLWYY 220


>ref|XP_002320281.1| predicted protein [Populus trichocarpa] gi|222861054|gb|EEE98596.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/86 (76%), Positives = 76/86 (88%)
 Frame = +3

Query: 18  SKPPEGSLEKTTVSLIALVLFIELSAEMYKAGVPDNIEAYILFALAELIWLNLDGTWLGF 197
           SK PEGS EKT ++L+AL+LFIELSAEMY+AG+ DNIEAYILFALAELIW  LD TW+GF
Sbjct: 116 SKVPEGSPEKTAIALVALLLFIELSAEMYRAGIADNIEAYILFALAELIWFYLDRTWIGF 175

Query: 198 TLACVVGFGCPLAEIPIIKLFHLWYY 275
           TLA ++G  CPLAEIPI+KLFHLWYY
Sbjct: 176 TLASIIGLCCPLAEIPIMKLFHLWYY 201


>ref|XP_002874950.1| hypothetical protein ARALYDRAFT_490383 [Arabidopsis lyrata subsp.
           lyrata] gi|297320787|gb|EFH51209.1| hypothetical protein
           ARALYDRAFT_490383 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/89 (70%), Positives = 78/89 (87%)
 Frame = +3

Query: 9   SSTSKPPEGSLEKTTVSLIALVLFIELSAEMYKAGVPDNIEAYILFALAELIWLNLDGTW 188
           +++ KPP G+L+KT +SL+ALV+F+ELSAEMYKAGV DNIEAYILFALAE IW +LD TW
Sbjct: 115 ATSIKPPRGNLDKTIISLLALVVFLELSAEMYKAGVSDNIEAYILFALAEFIWFSLDRTW 174

Query: 189 LGFTLACVVGFGCPLAEIPIIKLFHLWYY 275
           LGFT+A ++G  CPLAEIPI++ FHLWYY
Sbjct: 175 LGFTIATLLGVACPLAEIPIMQFFHLWYY 203


>ref|XP_003518704.1| PREDICTED: uncharacterized protein LOC100306404 [Glycine max]
          Length = 255

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/86 (74%), Positives = 72/86 (83%)
 Frame = +3

Query: 18  SKPPEGSLEKTTVSLIALVLFIELSAEMYKAGVPDNIEAYILFALAELIWLNLDGTWLGF 197
           +K  E SL KT VSLI L LFIELSA++YKAG+ +NIEAYILFA AE IW  LD TWLGF
Sbjct: 124 NKVQEASLAKTIVSLILLALFIELSADLYKAGISNNIEAYILFAAAEFIWFFLDRTWLGF 183

Query: 198 TLACVVGFGCPLAEIPIIKLFHLWYY 275
           TLAC+VG GCPLAE+PI+KLFHLWYY
Sbjct: 184 TLACIVGLGCPLAEVPIMKLFHLWYY 209


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