BLASTX nr result

ID: Coptis25_contig00040167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040167
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]   103   1e-20
ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003624395.1| hypothetical protein MTR_7g082730 [Medicago ...   101   5e-20

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 3/116 (2%)
 Frame = -3

Query: 393 QYQRIDGAIT--KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAKLRDAYINMM 220
           +YQR DGAIT  KN K  R GG  +R WKIK  PKL+    I SP+KLM+KL++AYINMM
Sbjct: 20  RYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKLMSKLKNAYINMM 79

Query: 219 LGLAGNVGSLSGDNFFGGKRIPRARKISKVS-KTDVFETKLIFEIYKALKASRELA 55
           LG+AGNV    G N FG +R+PR R++   +  ++ FE +L++EIYK L A+REL+
Sbjct: 80  LGMAGNV---DGTNVFGNRRVPRGRQVKAPNYPSEAFEKRLVYEIYKNLLATRELS 132


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/115 (49%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
 Frame = -3

Query: 393 QYQRIDGAIT--KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAKLRDAYINMM 220
           +YQR+DGAIT  KN    R GG  +RTWKIK  PKL+    I SP KL+ KL++AYI+M+
Sbjct: 20  RYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKLLRKLKNAYISMI 79

Query: 219 LGLAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKALKASRELA 55
           L +AGN     G + FG KR+PR R++     ++ FE +L++EIYK L A+REL+
Sbjct: 80  LSVAGNA---DGTHVFGDKRVPRGRQVKAAYPSEAFEKRLVYEIYKNLLATRELS 131


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/95 (50%), Positives = 73/95 (76%)
 Frame = -3

Query: 393 QYQRIDGAITKNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAKLRDAYINMMLG 214
           +YQR+D A  +N K +RLGGK++R W+I+  PKL   LKI+SP+KL+AKL++AY++MML 
Sbjct: 20  KYQRLDVANKRNVKMVRLGGKQRRFWRIRQIPKLH--LKIISPLKLLAKLKNAYVSMMLN 77

Query: 213 LAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFE 109
           L+G+VG+L+  N FGGKR+P+AR++      + F+
Sbjct: 78  LSGSVGALNSGNVFGGKRVPKARQVPIAYSNEEFD 112


>ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|222864955|gb|EEF02086.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/113 (47%), Positives = 78/113 (69%)
 Frame = -3

Query: 393 QYQRIDGAITKNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAKLRDAYINMMLG 214
           +YQR++GA  +  K  RLG  R+  WK++  PKL   ++I SPIKL+AK  DAYI+MML 
Sbjct: 20  RYQRLNGASKRKLKIARLGSGRR--WKLRAVPKLH--MEIASPIKLLAKFHDAYIDMMLR 75

Query: 213 LAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKALKASRELA 55
           LA N+GSL+   FF GK++ + + IS VS  D  +++L+ EIYK L ASR+++
Sbjct: 76  LATNIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDSRLLLEIYKKLAASRDMS 128


>ref|XP_003624395.1| hypothetical protein MTR_7g082730 [Medicago truncatula]
           gi|355499410|gb|AES80613.1| hypothetical protein
           MTR_7g082730 [Medicago truncatula]
          Length = 213

 Score =  101 bits (252), Expect = 5e-20
 Identities = 58/117 (49%), Positives = 80/117 (68%), Gaps = 6/117 (5%)
 Frame = -3

Query: 390 YQRIDGAIT-----KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAKLRDAYIN 226
           Y+R+D  +T     K  + IR+   R R WKI+ +PKL+W ++  SP+KL+ K+++ Y+N
Sbjct: 12  YRRLDYGMTTTGRRKKMQVIRMRSPR-RDWKIRTSPKLRWMIR--SPLKLLTKVKNTYMN 68

Query: 225 MMLGLAGNVG-SLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKALKASREL 58
            ML LAGNVG +L+ DN FG KRIP+AR++SK    D FE +LIFEI K L AS EL
Sbjct: 69  FMLKLAGNVGGALNTDNKFGMKRIPKARQVSKGYSGDAFEARLIFEISKTLVASHEL 125



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = -3

Query: 261 KLMAKLRDAYINMMLGLAGNVG-SLSGDNFFGGKRIPRARKISKVSKTDVFETKLIF 94
           K++ K+++ Y+N ML LAGNVG +L+ DN FG KRIP+AR++SK    D FE +LIF
Sbjct: 157 KMVTKIKNTYMNFMLKLAGNVGGALNTDNKFGVKRIPKARQVSKGYSGDAFEARLIF 213


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