BLASTX nr result

ID: Coptis25_contig00040158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040158
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141347.1| PREDICTED: uncharacterized protein LOC101215...    92   6e-17
ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266...    91   1e-16
emb|CAN82880.1| hypothetical protein VITISV_008554 [Vitis vinifera]    91   1e-16
ref|XP_002516151.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_004141347.1| PREDICTED: uncharacterized protein LOC101215994 [Cucumis sativus]
           gi|449486719|ref|XP_004157380.1| PREDICTED:
           uncharacterized protein LOC101231588 [Cucumis sativus]
          Length = 170

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = -3

Query: 265 MRNNWLFFMDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQ 86
           MRNNW+FF+DLDG  PY    EPF      GHL SH SS +DNS +QSR+ Y+ GSLALQ
Sbjct: 1   MRNNWVFFIDLDGGSPYILPIEPFG-----GHLFSHISSFMDNSLFQSRNLYMTGSLALQ 55

Query: 85  QAYNRVSKFAGALL 44
           +A+N  SK AGALL
Sbjct: 56  EAFNCFSKIAGALL 69


>ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266232 [Vitis vinifera]
           gi|296081726|emb|CBI20731.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = -3

Query: 265 MRNNWLFFMDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQ 86
           MRN WLFFMD DG  PY   P    S+ F GHLLSH +S VDNS Y SR  Y PGS ALQ
Sbjct: 1   MRNIWLFFMDFDGGSPY-IDPTESISNSFGGHLLSHVTSFVDNSVYGSRRIYAPGSAALQ 59

Query: 85  QAYNRVSKFAGALL----SGKLQGSRH 17
           +A++ +SKFAGA+L    SG     RH
Sbjct: 60  EAFDCISKFAGAVLLQLSSGSNSNIRH 86


>emb|CAN82880.1| hypothetical protein VITISV_008554 [Vitis vinifera]
          Length = 352

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = -3

Query: 265 MRNNWLFFMDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQ 86
           MRN WLFFMD DG  PY   P    S+ F GHLLSH +S VDNS Y SR  Y PGS ALQ
Sbjct: 1   MRNIWLFFMDFDGGSPY-IDPTESISNSFGGHLLSHVTSFVDNSVYGSRRIYAPGSAALQ 59

Query: 85  QAYNRVSKFAGALL----SGKLQGSRH 17
           +A++ +SKFAGA+L    SG     RH
Sbjct: 60  EAFDCISKFAGAVLLRLSSGSNSNIRH 86


>ref|XP_002516151.1| conserved hypothetical protein [Ricinus communis]
           gi|223544637|gb|EEF46153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/74 (51%), Positives = 44/74 (59%)
 Frame = -3

Query: 265 MRNNWLFFMDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQ 86
           MRNNWLFFM+ D   P     EP  S    G L S     +DNS +QSR  Y+PGSLA Q
Sbjct: 1   MRNNWLFFMNPDDGSPNILPIEPLLSQSLRGPLFSP----LDNSLHQSRFLYIPGSLAFQ 56

Query: 85  QAYNRVSKFAGALL 44
           +  N +SK AGALL
Sbjct: 57  EVLNCMSKLAGALL 70


>ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|222854494|gb|EEE92041.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/66 (48%), Positives = 39/66 (59%)
 Frame = -3

Query: 241 MDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQQAYNRVSK 62
           MDL+G   YTF  EP  S  F   L S  SS VDN  +QS   +VP ++A Q+A N VSK
Sbjct: 1   MDLNGESQYTFPLEPLLSQGFGAILFSQISSFVDNPLHQSGFLHVPETMAFQEALNHVSK 60

Query: 61  FAGALL 44
            AG L+
Sbjct: 61  LAGGLI 66


Top