BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040148
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           103   1e-20
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]   101   5e-20
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   100   1e-19
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   100   1e-19
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    100   2e-19

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/101 (49%), Positives = 67/101 (66%)
 Frame = -1

Query: 305 RHVPDIRLSLISTRKLDDAGFLNLFGNGVWKLSRCFFMVAKGKKTCSLYKTQASLCKAEL 126
           RHVPD+RL+LIS  KLD+ G+ N F NG WKL++   MVA+G K   LY TQAS+ +  +
Sbjct: 352 RHVPDMRLNLISVDKLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASISQQVI 411

Query: 125 YAAQEETSSKLWHKRLCHMGEKGMKVLAKQKALPNIKGTHL 3
             A+ +++ KLWH+RL HM EK M  L K+ ALP +    L
Sbjct: 412 NVAENDSNIKLWHRRLGHMSEKSMARLVKKNALPGLNQIQL 452


>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
          Length = 1204

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/97 (47%), Positives = 67/97 (69%)
 Frame = -1

Query: 305 RHVPDIRLSLISTRKLDDAGFLNLFGNGVWKLSRCFFMVAKGKKTCSLYKTQASLCKAEL 126
           +H+PDIR++LISTRKLDD GF N F +  W L+R   ++AKG K+ SLY  QA +  + +
Sbjct: 303 KHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMVIAKGNKSSSLYLMQARVIDSNI 362

Query: 125 YAAQEETSSKLWHKRLCHMGEKGMKVLAKQKALPNIK 15
            A  ++++ +LWH RL HM EKG+ +LAK+  L  +K
Sbjct: 363 NAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMK 399


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/99 (47%), Positives = 68/99 (68%)
 Frame = -1

Query: 305 RHVPDIRLSLISTRKLDDAGFLNLFGNGVWKLSRCFFMVAKGKKTCSLYKTQASLCKAEL 126
           RHVPD+R++LIS   LD  G+ + F N  W+L++   ++AKG    +LY+T A +C+ EL
Sbjct: 354 RHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGEL 413

Query: 125 YAAQEETSSKLWHKRLCHMGEKGMKVLAKQKALPNIKGT 9
            AAQ+E S  LWHKR+ HM EKG+++LAK+  +   KGT
Sbjct: 414 NAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGT 452


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/97 (46%), Positives = 67/97 (69%)
 Frame = -1

Query: 305 RHVPDIRLSLISTRKLDDAGFLNLFGNGVWKLSRCFFMVAKGKKTCSLYKTQASLCKAEL 126
           +H+PDIR++LIST KLDD GF N+F +  WKL+R   ++AKG K+ SLY  Q  +  + +
Sbjct: 234 KHIPDIRMNLISTGKLDDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTRVIDSSI 293

Query: 125 YAAQEETSSKLWHKRLCHMGEKGMKVLAKQKALPNIK 15
            A  ++++ +LWH RL HM EKG+ +LAK+  L  +K
Sbjct: 294 NAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMK 330


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/99 (46%), Positives = 67/99 (67%)
 Frame = -1

Query: 305 RHVPDIRLSLISTRKLDDAGFLNLFGNGVWKLSRCFFMVAKGKKTCSLYKTQASLCKAEL 126
           RHVPD+R++LIS   LD  G+ N F N  W+L++   ++AKG    +LY+T A +C+ EL
Sbjct: 355 RHVPDLRMNLISGIALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAEICQGEL 414

Query: 125 YAAQEETSSKLWHKRLCHMGEKGMKVLAKQKALPNIKGT 9
            AA EE S+ LWHKR+ H  EKG+++L+K+  +   KGT
Sbjct: 415 NAAHEENSADLWHKRMGHTSEKGLQILSKKSLISFTKGT 453