BLASTX nr result
ID: Coptis25_contig00040129
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00040129 (276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera] 39 1e-06 emb|CBI30363.3| unnamed protein product [Vitis vinifera] 39 1e-06 ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|2... 39 6e-06 >emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera] Length = 685 Score = 38.9 bits (89), Expect(2) = 1e-06 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = -1 Query: 162 NSTSMSSQEMYMVLNHYGFAVPNENEENLSVEDYF 58 NST +SS+E++ +L +YG +N+ +L VEDYF Sbjct: 594 NSTCISSEEVFKILKYYGLEHSEDNKMHLPVEDYF 628 Score = 38.1 bits (87), Expect(2) = 1e-06 Identities = 18/25 (72%), Positives = 19/25 (76%) Frame = -3 Query: 79 FVSGRLFWFWPWEIIYYQRLKKGAI 5 F S RL WPWEIIYY+RLKKG I Sbjct: 628 FGSARL---WPWEIIYYRRLKKGPI 649 >emb|CBI30363.3| unnamed protein product [Vitis vinifera] Length = 651 Score = 38.9 bits (89), Expect(2) = 1e-06 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = -1 Query: 162 NSTSMSSQEMYMVLNHYGFAVPNENEENLSVEDYF 58 NST +SS+E++ +L +YG +N+ +L VEDYF Sbjct: 547 NSTCISSEEVFKILKYYGLEHSEDNKMHLPVEDYF 581 Score = 38.1 bits (87), Expect(2) = 1e-06 Identities = 18/25 (72%), Positives = 19/25 (76%) Frame = -3 Query: 79 FVSGRLFWFWPWEIIYYQRLKKGAI 5 F S RL WPWEIIYY+RLKKG I Sbjct: 581 FGSARL---WPWEIIYYRRLKKGPI 602 >ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|222854422|gb|EEE91969.1| predicted protein [Populus trichocarpa] Length = 693 Score = 38.5 bits (88), Expect(2) = 6e-06 Identities = 18/42 (42%), Positives = 26/42 (61%) Frame = -1 Query: 183 PCTVQNKNSTSMSSQEMYMVLNHYGFAVPNENEENLSVEDYF 58 P + + +STS+S+ E+ VL HYG +ENE+ L E YF Sbjct: 595 PASSSSFHSTSISAGELSSVLKHYGLGCQDENEKPLPAEAYF 636 Score = 36.2 bits (82), Expect(2) = 6e-06 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = -3 Query: 79 FVSGRLFWFWPWEIIYYQRLKKGAI 5 F S RL WPWEII+Y+RLKKG I Sbjct: 636 FGSARL---WPWEIIHYRRLKKGLI 657