BLASTX nr result

ID: Coptis25_contig00040129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040129
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]    39   1e-06
emb|CBI30363.3| unnamed protein product [Vitis vinifera]               39   1e-06
ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|2...    39   6e-06

>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
          Length = 685

 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = -1

Query: 162 NSTSMSSQEMYMVLNHYGFAVPNENEENLSVEDYF 58
           NST +SS+E++ +L +YG     +N+ +L VEDYF
Sbjct: 594 NSTCISSEEVFKILKYYGLEHSEDNKMHLPVEDYF 628



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 18/25 (72%), Positives = 19/25 (76%)
 Frame = -3

Query: 79  FVSGRLFWFWPWEIIYYQRLKKGAI 5
           F S RL   WPWEIIYY+RLKKG I
Sbjct: 628 FGSARL---WPWEIIYYRRLKKGPI 649


>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = -1

Query: 162 NSTSMSSQEMYMVLNHYGFAVPNENEENLSVEDYF 58
           NST +SS+E++ +L +YG     +N+ +L VEDYF
Sbjct: 547 NSTCISSEEVFKILKYYGLEHSEDNKMHLPVEDYF 581



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 18/25 (72%), Positives = 19/25 (76%)
 Frame = -3

Query: 79  FVSGRLFWFWPWEIIYYQRLKKGAI 5
           F S RL   WPWEIIYY+RLKKG I
Sbjct: 581 FGSARL---WPWEIIYYRRLKKGPI 602


>ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|222854422|gb|EEE91969.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score = 38.5 bits (88), Expect(2) = 6e-06
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -1

Query: 183 PCTVQNKNSTSMSSQEMYMVLNHYGFAVPNENEENLSVEDYF 58
           P +  + +STS+S+ E+  VL HYG    +ENE+ L  E YF
Sbjct: 595 PASSSSFHSTSISAGELSSVLKHYGLGCQDENEKPLPAEAYF 636



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -3

Query: 79  FVSGRLFWFWPWEIIYYQRLKKGAI 5
           F S RL   WPWEII+Y+RLKKG I
Sbjct: 636 FGSARL---WPWEIIHYRRLKKGLI 657


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