BLASTX nr result

ID: Coptis25_contig00040124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040124
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34706.3| unnamed protein product [Vitis vinifera]              112   1e-24
ref|XP_002277019.1| PREDICTED: uncharacterized protein LOC100244...   112   1e-24
ref|XP_002321132.1| predicted protein [Populus trichocarpa] gi|2...   108   7e-24
ref|XP_003559000.1| PREDICTED: uncharacterized protein LOC100832...   100   5e-22
ref|XP_004160978.1| PREDICTED: uncharacterized LOC101221322 [Cuc...   100   1e-21

>emb|CBI34706.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  112 bits (279), Expect(2) = 1e-24
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = -3

Query: 296 EVEDDILPIFRKGEEFNYGVEFILVISIVEGSLVGCMEDALAALEKLIVEFPSLIVQATQ 117
           EVEDDILPIFRKGEEFNYGVEFIL+IS  +    G  EDALA+L +LI+EFPSLIVQ+TQ
Sbjct: 175 EVEDDILPIFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQSTQ 234

Query: 116 GANLNLNSRKYTHAAVLRFRTYVDLKI 36
           G N   +S++YTH  V+RFR+   L++
Sbjct: 235 GLNFCPSSKEYTHGVVIRFRSIEALEL 261



 Score = 25.8 bits (55), Expect(2) = 1e-24
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -1

Query: 64  DFEHMWISKFEPITEKSLAVH 2
           +++ +W SKF+ I +K+L +H
Sbjct: 267 EYKDIWRSKFQMIVQKTLPIH 287


>ref|XP_002277019.1| PREDICTED: uncharacterized protein LOC100244522 [Vitis vinifera]
          Length = 241

 Score =  112 bits (279), Expect(2) = 1e-24
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = -3

Query: 296 EVEDDILPIFRKGEEFNYGVEFILVISIVEGSLVGCMEDALAALEKLIVEFPSLIVQATQ 117
           EVEDDILPIFRKGEEFNYGVEFIL+IS  +    G  EDALA+L +LI+EFPSLIVQ+TQ
Sbjct: 118 EVEDDILPIFRKGEEFNYGVEFILLISFAKSKFGGPAEDALASLAELILEFPSLIVQSTQ 177

Query: 116 GANLNLNSRKYTHAAVLRFRTYVDLKI 36
           G N   +S++YTH  V+RFR+   L++
Sbjct: 178 GLNFCPSSKEYTHGVVIRFRSIEALEL 204



 Score = 25.8 bits (55), Expect(2) = 1e-24
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -1

Query: 64  DFEHMWISKFEPITEKSLAVH 2
           +++ +W SKF+ I +K+L +H
Sbjct: 210 EYKDIWRSKFQMIVQKTLPIH 230


>ref|XP_002321132.1| predicted protein [Populus trichocarpa] gi|222861905|gb|EEE99447.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  108 bits (269), Expect(2) = 7e-24
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -3

Query: 296 EVEDDILPIFRKGEEFNYGVEFILVISIVEGSLVGCMEDALAALEKLIVEFPSLIVQATQ 117
           EVEDD++PIFRKGEEFNYG EF+ + +  + +L   +EDALA+LEKL  EFPSLIVQ+TQ
Sbjct: 107 EVEDDMIPIFRKGEEFNYGEEFVHLFAFDDSALGAPVEDALASLEKLKKEFPSLIVQSTQ 166

Query: 116 GANLNLNSRKYTHAAVLRFRT 54
           G+N NL+S++YTHA V RFR+
Sbjct: 167 GSNFNLSSKEYTHAVVTRFRS 187



 Score = 27.3 bits (59), Expect(2) = 7e-24
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 64  DFEHMWISKFEPITEKSLAVH 2
           ++  +W SKFE IT K+L +H
Sbjct: 199 EYRDVWRSKFELITRKTLPIH 219


>ref|XP_003559000.1| PREDICTED: uncharacterized protein LOC100832376 [Brachypodium
           distachyon]
          Length = 288

 Score =  100 bits (248), Expect(2) = 5e-22
 Identities = 49/87 (56%), Positives = 67/87 (77%)
 Frame = -3

Query: 296 EVEDDILPIFRKGEEFNYGVEFILVISIVEGSLVGCMEDALAALEKLIVEFPSLIVQATQ 117
           EVEDDI P+FR+GE+FNYGVEFIL++S +E +    +EDALA L+KLI++  S IVQAT 
Sbjct: 165 EVEDDITPLFRRGEDFNYGVEFILLLSFLETASGEAVEDALAHLQKLIIQCSSFIVQATS 224

Query: 116 GANLNLNSRKYTHAAVLRFRTYVDLKI 36
           G  LNL   +Y++AAV+RF ++ D K+
Sbjct: 225 GCCLNLMESRYSNAAVIRFPSFDDFKL 251



 Score = 29.3 bits (64), Expect(2) = 5e-22
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 64  DFEHMWISKFEPITEKSLAVH 2
           +++ MW SK +P+ E+SL +H
Sbjct: 257 EYKDMWASKLDPVVERSLELH 277


>ref|XP_004160978.1| PREDICTED: uncharacterized LOC101221322 [Cucumis sativus]
          Length = 287

 Score =  100 bits (248), Expect(2) = 1e-21
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = -3

Query: 296 EVEDDILPIFRKGEEFNYGVEFILVISIVEGSLVGCMEDALAALEKLIVEFPSLIVQATQ 117
           EVEDD+LPIFRKGEEFNYGVEF+L+I   + S    +EDAL +LE+L ++ PSLIVQ TQ
Sbjct: 164 EVEDDMLPIFRKGEEFNYGVEFVLLIKFRQDSFGKPLEDALNSLERLTIDNPSLIVQFTQ 223

Query: 116 GANLNLNSRKYTHAAVLRFRT 54
           G N N + +++TH  V+RFR+
Sbjct: 224 GLNFNPSCKEFTHGVVIRFRS 244



 Score = 28.1 bits (61), Expect(2) = 1e-21
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -1

Query: 61  FEHMWISKFEPITEKSLAVH 2
           ++ +W SKF+PI +K++A+H
Sbjct: 257 YKDIWKSKFQPIIQKTVALH 276


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