BLASTX nr result

ID: Coptis25_contig00040095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040095
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 RLGFSYVKAIV*RTWKVKNFIVRTYGDN-MFTFEFERDEDRSTALDIGSFHIASHLFVIR 131
           +L +  V +I  R W           DN  F F F+  +  +  L+   +H+A+   V++
Sbjct: 165 KLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLK 224

Query: 130 PWKPFVEAEANEMKTIPIWVIMKKFPMELWNKEGFSKVASVIG 2
            W+P ++   +++ T+P+WV +   P+E W  EG S VAS IG
Sbjct: 225 RWQPNMQFLKDDLATVPVWVWLYNVPLEYWTIEGLSCVASAIG 267


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
 Frame = -3

Query: 292 YVKAIV*RTW-KVKNFIVRTYGDNMFTFEFERDEDRSTALDIGS-FHIASHLFVIRPWKP 119
           ++ +++   W K  N  V + G  +F  +FE    +  AL  G  F+  S  F+++PW  
Sbjct: 54  FINSLIDSEWRKYGNVKVYSQGSGVFVLDFESAHGKVLALGEGPRFYDGSKPFILKPWSR 113

Query: 118 FVEAEANEMKTIPIWVIMKKFPMELWNKEGFSKVASVIG 2
            +  E  E+K+ P+W+ +    + LW+ E  SK+AS++G
Sbjct: 114 DLSLEIKELKSAPVWIKLPNLRLHLWSPEALSKIASLVG 152


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = -3

Query: 292 YVKAIV*RTW-KVKNFIVRTYGDNMFTFEFERDEDRSTALDIGS-FHIASHLFVIRPWKP 119
           ++  ++   W K  N  V + G  +F  +FE    +  AL  G  F+  S  F+++PW  
Sbjct: 54  FINNLIDSEWRKYGNVKVYSKGSGVFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSR 113

Query: 118 FVEAEANEMKTIPIWVIMKKFPMELWNKEGFSKVASVIG 2
            +  E  E+K+ PIW+ +    + LW+ E   K+AS++G
Sbjct: 114 DLSLEIKELKSAPIWIKLPNLRLHLWSPEALGKIASLVG 152


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 RLGFSYVKAIV*RTWKVKNFIVRTYGDN-MFTFEFERDEDRSTALDIGSFHIASHLFVIR 131
           +L +  V +I  R W           DN  F F F+  +  +  L+   +H+A+   V++
Sbjct: 18  KLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLESAPWHMANRPLVLK 77

Query: 130 PWKPFVEAEANEMKTIPIWVIMKKFPMELWNKEGFSKVASVIG 2
            W+P ++   +++  +P+WV +   P+E W  +G S VAS IG
Sbjct: 78  RWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAIG 120


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 RLGFSYVKAIV*RTWKVKNFIVRTYGDN-MFTFEFERDEDRSTALDIGSFHIASHLFVIR 131
           +L +  V +I  R W     +     DN  F F F+  +  +  L+   +H+A+   V++
Sbjct: 165 KLPYPVVNSIAKRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLK 224

Query: 130 PWKPFVEAEANEMKTIPIWVIMKKFPMELWNKEGFSKVASVIG 2
            W+P ++   +++  +P+WV +   P+E W  +G S VAS IG
Sbjct: 225 RWQPNMQFLKDDLARVPVWVWLYNVPLEYWTIKGLSCVASAIG 267


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