BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040082
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   202   4e-50
dbj|BAJ06702.1| unnamed protein product [Solanum lycopersicum]        198   6e-49
ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   197   1e-48
ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   196   2e-48
ref|XP_002313567.1| predicted protein [Populus trichocarpa] gi|2...   193   2e-47

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 1116

 Score =  202 bits (514), Expect = 4e-50
 Identities = 103/221 (46%), Positives = 132/221 (59%), Gaps = 5/221 (2%)
 Frame = +3

Query: 3    PIKRRHLLFNRNMPAVAKDLTESFARKNMQVSKVPSLFMGDLIGY-----GDRDCWNYLR 167
            P K R+   N+N+    K   +   +  + VS+     + +  GY     G++DC NY+ 
Sbjct: 451  PTKSRYFRCNKNLDPHTKRRLDINDQAGINVSRNFRSMVVEANGYDNLTFGEKDCRNYID 510

Query: 168  TTREIRKRLGEGDAQLVINIFQRKYKENPQFFFDVQVDQKGRAANFFWVDPRSRMTYEQF 347
              R  R RLG GDA+ + N F R  K+N QF++ + VD K R  N FWVD R R  YE F
Sbjct: 511  KAR--RLRLGTGDAEAIQNYFVRMQKKNSQFYYVMDVDDKSRLRNVFWVDARCRAAYEYF 568

Query: 348  GDVVTFDSTYRTNKFKMSFAPFTGVNHHYQSIQFGCAFLHDETEATFYWLFKTWVEAMGG 527
            G+V+TFD+TY TNK+ M FAPF GVNHH QS+  GCA L +E   TF WLFKTW+E M G
Sbjct: 569  GEVITFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTKTFSWLFKTWLECMHG 628

Query: 528  RHPTSIIIDQDPAMCDVIKKVFPNTTHRLCIWHIKMKFGEK 650
            R P +II DQD AM   I+ VFP   HR C+WH+  K  EK
Sbjct: 629  RAPNAIITDQDRAMKKAIEDVFPKARHRWCLWHLMKKVPEK 669


>dbj|BAJ06702.1| unnamed protein product [Solanum lycopersicum]
          Length = 718

 Score =  198 bits (504), Expect = 6e-49
 Identities = 100/220 (45%), Positives = 135/220 (61%), Gaps = 5/220 (2%)
 Frame = +3

Query: 3   PIKRRHLLFNRNMPAVAKDLTESFARKNMQVSKVPSLFMGDLIGYGD-----RDCWNYLR 167
           P  ++ L   R      K+L +      ++ SK+ S+      G  +     RD  NYL 
Sbjct: 121 PNSQKFLRSKRKKSEAQKNLIDLLNNSGIRPSKIASVLTTQAGGIENLNITGRDIQNYLS 180

Query: 168 TTREIRKRLGEGDAQLVINIFQRKYKENPQFFFDVQVDQKGRAANFFWVDPRSRMTYEQF 347
           T R+    L +GDAQL++  FQ++  ++P  F+ +Q+D +G  AN FWVD RSR+ Y+ F
Sbjct: 181 TKRQ--NCLEKGDAQLMLKYFQKRQSDSPGLFYAIQMDVEGHLANCFWVDARSRIAYKNF 238

Query: 348 GDVVTFDSTYRTNKFKMSFAPFTGVNHHYQSIQFGCAFLHDETEATFYWLFKTWVEAMGG 527
           GDVV FD TY TNK+KM F PFTGVN+H+QSI FGC+ L DET+ TF WL  TW EAM G
Sbjct: 239 GDVVLFDPTYLTNKYKMPFVPFTGVNNHHQSILFGCSLLWDETKETFQWLLHTWQEAMFG 298

Query: 528 RHPTSIIIDQDPAMCDVIKKVFPNTTHRLCIWHIKMKFGE 647
             P +II DQD A+ + + KVFPN+ H  C+WHI+ K  E
Sbjct: 299 ISPRTIITDQDAAITNAVAKVFPNSAHPFCMWHIEKKIPE 338


>ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 777

 Score =  197 bits (501), Expect = 1e-48
 Identities = 97/212 (45%), Positives = 131/212 (61%), Gaps = 5/212 (2%)
 Frame = +3

Query: 30  NRNMPAVAKDLTESFARKNMQVSKVPSLFMGDL-----IGYGDRDCWNYLRTTREIRKRL 194
           +R +   AK L ++     M   ++ S  + +      +G+ + DC NY+R  R    R 
Sbjct: 171 HRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNR---LRS 227

Query: 195 GEGDAQLVINIFQRKYKENPQFFFDVQVDQKGRAANFFWVDPRSRMTYEQFGDVVTFDST 374
            EGD QLV++  ++ + ENP FF+ VQ D+     N FW DP++RM Y  FGD VTFD+T
Sbjct: 228 LEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQSITNVFWADPKARMNYTFFGDTVTFDTT 287

Query: 375 YRTNKFKMSFAPFTGVNHHYQSIQFGCAFLHDETEATFYWLFKTWVEAMGGRHPTSIIID 554
           YR+N++++ FAPFTGVNHH Q + FGCAFL +E+EA+F WLFKTW+ AM GR P SI  D
Sbjct: 288 YRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPVSITTD 347

Query: 555 QDPAMCDVIKKVFPNTTHRLCIWHIKMKFGEK 650
            D  +   I +VFP T HR C WHI  K  EK
Sbjct: 348 HDSVIRSAIIQVFPETRHRFCKWHIFKKCQEK 379


>ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 783

 Score =  196 bits (499), Expect = 2e-48
 Identities = 99/221 (44%), Positives = 134/221 (60%), Gaps = 5/221 (2%)
 Frame = +3

Query: 3   PIKRRHLLFNRNMPAVAKDLTESFARKNMQVSKVPSLFMGDL-----IGYGDRDCWNYLR 167
           P K   L  +R +   AK L ++     M   ++ S  + +      +G+ + DC NY+R
Sbjct: 168 PDKVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMR 227

Query: 168 TTREIRKRLGEGDAQLVINIFQRKYKENPQFFFDVQVDQKGRAANFFWVDPRSRMTYEQF 347
             R+   R  EGD QL+++  ++ + ENP F + VQ D     +N FW DP+SRM Y  F
Sbjct: 228 NNRQ---RSLEGDIQLLLDYLRQMHAENPSFVYAVQGDDDQSPSNVFWADPKSRMNYTYF 284

Query: 348 GDVVTFDSTYRTNKFKMSFAPFTGVNHHYQSIQFGCAFLHDETEATFYWLFKTWVEAMGG 527
           GD VTFD+TYR+N++++ FAPFTGVNHH Q + FGCAFL +E+EA+F WLFKTW+ AM G
Sbjct: 285 GDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFIWLFKTWLMAMSG 344

Query: 528 RHPTSIIIDQDPAMCDVIKKVFPNTTHRLCIWHIKMKFGEK 650
           R P SI  D D  +   I +VFP T HR C WHI  K  EK
Sbjct: 345 RPPVSITTDHDAVIGLAISQVFPETRHRFCKWHIFKKCQEK 385


>ref|XP_002313567.1| predicted protein [Populus trichocarpa] gi|222849975|gb|EEE87522.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  193 bits (491), Expect = 2e-47
 Identities = 95/222 (42%), Positives = 133/222 (59%), Gaps = 6/222 (2%)
 Frame = +3

Query: 3   PIKRRHLL-FNRNMPAVAKDLTESFARKNMQVSKVPSLFMGDL-----IGYGDRDCWNYL 164
           P+ + H L  +R +   AK L ++     M   ++ S  + +      +G+ + DC NY+
Sbjct: 168 PLDQVHCLRSHRQISGPAKTLVDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYM 227

Query: 165 RTTREIRKRLGEGDAQLVINIFQRKYKENPQFFFDVQVDQKGRAANFFWVDPRSRMTYEQ 344
           R  R+   +  EGD QL+++  ++ + ENP FF+ +Q        N FW DPR+R  Y  
Sbjct: 228 RNNRQ---KSMEGDIQLLLDYLRQMHTENPNFFYALQGGDDQFTGNVFWSDPRARANYSY 284

Query: 345 FGDVVTFDSTYRTNKFKMSFAPFTGVNHHYQSIQFGCAFLHDETEATFYWLFKTWVEAMG 524
           FGD VTFD+TYR+N++++ FAP TGVNHH Q + FGCAFL +ETEA+F WLF+TW+ AM 
Sbjct: 285 FGDTVTFDTTYRSNRYRLPFAPLTGVNHHGQPVLFGCAFLLNETEASFIWLFQTWLTAMS 344

Query: 525 GRHPTSIIIDQDPAMCDVIKKVFPNTTHRLCIWHIKMKFGEK 650
           G HP SI  D D  +   I +VFP T HR C WHI  K  EK
Sbjct: 345 GHHPVSITTDHDAVISSAIMQVFPKTRHRFCKWHIFKKCQEK 386