BLASTX nr result

ID: Coptis25_contig00040070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040070
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      98   6e-19
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    94   9e-18
emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]    93   2e-17
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    93   2e-17
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    92   3e-17

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/72 (58%), Positives = 51/72 (70%)
 Frame = +2

Query: 2    YHPQSDGQTEVTNHTLECYLHCFASQNPHD*TRWLPWPELWYNTTYHFAIQMTPFQVVYS 181
            YHPQ+DGQTEVTN TLE YL C  +  P   ++WLP  E WYNTT+H AI+ TPF++VY 
Sbjct: 1302 YHPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLPLAEWWYNTTFHSAIKCTPFEIVYG 1361

Query: 182  RPPLSIFAYLPG 217
            +PP     YLPG
Sbjct: 1362 QPPPVHLPYLPG 1373


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 40/69 (57%), Positives = 46/69 (66%)
 Frame = +2

Query: 2    YHPQSDGQTEVTNHTLECYLHCFASQNPHD*TRWLPWPELWYNTTYHFAIQMTPFQVVYS 181
            YHPQ+DGQTEV N  LE YL CFA + P    +WLPW E WYNT+YH A + TPFQ VY 
Sbjct: 1361 YHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYG 1420

Query: 182  RPPLSIFAY 208
            R P  +  Y
Sbjct: 1421 REPPVLLRY 1429


>emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]
          Length = 790

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 39/73 (53%), Positives = 49/73 (67%)
 Frame = +2

Query: 2   YHPQSDGQTEVTNHTLECYLHCFASQNPHD*TRWLPWPELWYNTTYHFAIQMTPFQVVYS 181
           YHPQS+GQTEV N TLE YL CF    P    +W+PW E  YNT+ H + +MTPF+ VY 
Sbjct: 550 YHPQSNGQTEVVNRTLEQYLRCFVGDQPQKWLKWIPWAEFSYNTSTHSSTKMTPFEAVYG 609

Query: 182 RPPLSIFAYLPGS 220
            PP  + AY+PG+
Sbjct: 610 IPPPRLLAYVPGT 622


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/73 (57%), Positives = 47/73 (64%)
 Frame = +2

Query: 2    YHPQSDGQTEVTNHTLECYLHCFASQNPHD*TRWLPWPELWYNTTYHFAIQMTPFQVVYS 181
            YHPQSDGQTEV N  +E YL CF    P      LPW E WYNTTYH +  MTPFQ +Y 
Sbjct: 1075 YHPQSDGQTEVVNRCIEQYLRCFVHHKPRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYG 1134

Query: 182  RPPLSIFAYLPGS 220
            RPP +I +Y  GS
Sbjct: 1135 RPPPAIPSYEIGS 1147


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = +2

Query: 2    YHPQSDGQTEVTNHTLECYLHCFASQNPHD*TRWLPWPELWYNTTYHFAIQMTPFQVVYS 181
            YHPQ+DGQTEV N ++E YL CF S+ P +  +WL W E WYNTT+H ++ +TPFQ VY 
Sbjct: 2183 YHPQTDGQTEVVNRSVETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYG 2242

Query: 182  RPPLSIFAY 208
            R P  +  Y
Sbjct: 2243 RTPPPLLYY 2251


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