BLASTX nr result

ID: Coptis25_contig00040048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040048
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529206.1| Regulator of ribonuclease activity A, putati...   139   2e-31
ref|XP_002330568.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
gb|AFK46751.1| unknown [Lotus japonicus]                              136   2e-30
ref|NP_001235681.1| uncharacterized protein LOC100500019 [Glycin...   135   4e-30
ref|XP_003593380.1| Regulator of ribonuclease-like protein [Medi...   134   6e-30

>ref|XP_002529206.1| Regulator of ribonuclease activity A, putative [Ricinus communis]
           gi|223531324|gb|EEF33162.1| Regulator of ribonuclease
           activity A, putative [Ricinus communis]
          Length = 166

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/85 (77%), Positives = 72/85 (84%)
 Frame = -1

Query: 255 ETRGEGRVLVIDGGGSMRSAVLGGNLVQLAQTMGWAGIVVNGCIRDVDEINACDIGVRAL 76
           ETRGEGRVLVIDGGGSMR A++GGNL QLAQ MGWAGI+VNGCIRDVDEIN CDIGVRAL
Sbjct: 59  ETRGEGRVLVIDGGGSMRCALVGGNLGQLAQNMGWAGIIVNGCIRDVDEINGCDIGVRAL 118

Query: 75  ASHPLKPGKKRTGEVHGIIHIGGAM 1
           ASHP+K  KK  GE H  +HI G +
Sbjct: 119 ASHPMKSNKKGMGEKHVTVHIAGTL 143


>ref|XP_002330568.1| predicted protein [Populus trichocarpa] gi|222872126|gb|EEF09257.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/85 (76%), Positives = 71/85 (83%)
 Frame = -1

Query: 255 ETRGEGRVLVIDGGGSMRSAVLGGNLVQLAQTMGWAGIVVNGCIRDVDEINACDIGVRAL 76
           ET GEGRVLV+DGGGSMR A++GGNL QLAQTMGWAGI+VNGCIRDVDEIN CDIGVRAL
Sbjct: 59  ETEGEGRVLVVDGGGSMRCALVGGNLGQLAQTMGWAGILVNGCIRDVDEINGCDIGVRAL 118

Query: 75  ASHPLKPGKKRTGEVHGIIHIGGAM 1
            SHP K  KK  GE H  +HIGG +
Sbjct: 119 GSHPTKSFKKGVGEKHVAVHIGGTL 143


>gb|AFK46751.1| unknown [Lotus japonicus]
          Length = 166

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/85 (72%), Positives = 75/85 (88%)
 Frame = -1

Query: 255 ETRGEGRVLVIDGGGSMRSAVLGGNLVQLAQTMGWAGIVVNGCIRDVDEINACDIGVRAL 76
           E +GEGRVLVIDGGGSMR A++GGN+V+LAQ+MGWAG+VVNGC+RDVDEIN CD GVRAL
Sbjct: 59  EMKGEGRVLVIDGGGSMRCALMGGNMVRLAQSMGWAGVVVNGCVRDVDEINECDFGVRAL 118

Query: 75  ASHPLKPGKKRTGEVHGIIHIGGAM 1
           AS+PLK GKK TGE H  +++ GA+
Sbjct: 119 ASYPLKSGKKGTGEKHVPVYVAGAL 143


>ref|NP_001235681.1| uncharacterized protein LOC100500019 [Glycine max]
           gi|255628545|gb|ACU14617.1| unknown [Glycine max]
          Length = 166

 Score =  135 bits (340), Expect = 4e-30
 Identities = 61/83 (73%), Positives = 75/83 (90%)
 Frame = -1

Query: 255 ETRGEGRVLVIDGGGSMRSAVLGGNLVQLAQTMGWAGIVVNGCIRDVDEINACDIGVRAL 76
           ET+GEGRVLV+DGGGS+R A++GGNLVQ+A  MGWAGIVVNGC+RDVD+INAC+IGVRAL
Sbjct: 59  ETKGEGRVLVVDGGGSLRRALMGGNLVQIAYNMGWAGIVVNGCVRDVDDINACNIGVRAL 118

Query: 75  ASHPLKPGKKRTGEVHGIIHIGG 7
           ASHPL+  KKRTGE +  +++GG
Sbjct: 119 ASHPLRSNKKRTGEKNVPVYVGG 141


>ref|XP_003593380.1| Regulator of ribonuclease-like protein [Medicago truncatula]
           gi|355482428|gb|AES63631.1| Regulator of
           ribonuclease-like protein [Medicago truncatula]
          Length = 686

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/83 (74%), Positives = 71/83 (85%)
 Frame = -1

Query: 255 ETRGEGRVLVIDGGGSMRSAVLGGNLVQLAQTMGWAGIVVNGCIRDVDEINACDIGVRAL 76
           ET+GEGRVLV+DGGGSMR A++GGNLVQLAQ  GW+GIVVNGCIRDVDEIN C +GVRAL
Sbjct: 579 ETKGEGRVLVVDGGGSMRCALVGGNLVQLAQNKGWSGIVVNGCIRDVDEINLCQVGVRAL 638

Query: 75  ASHPLKPGKKRTGEVHGIIHIGG 7
           ASHPLK  K  TGE H  +++GG
Sbjct: 639 ASHPLKSNKNGTGEKHVAVYVGG 661


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