BLASTX nr result

ID: Coptis25_contig00040035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040035
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250...    66   3e-09
emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinife...    66   3e-09
emb|CBI17403.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003631897.1| PREDICTED: uncharacterized protein LOC100854...    60   2e-07
ref|XP_002313758.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250389 [Vitis vinifera]
          Length = 957

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/74 (47%), Positives = 42/74 (56%)
 Frame = +3

Query: 6   PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185
           PD PS W    D   SR   L +S SCRA+LM GS SP   K E+  +TPPSG EKDF G
Sbjct: 625 PDEPSPWALDADTPSSRSLTLTRSWSCRANLMTGSSSPC-EKVEQRLSTPPSGFEKDFPG 683

Query: 186 KLRDIQRKFATSNY 227
           +    +R+    NY
Sbjct: 684 RPESFRRRHPPLNY 697


>emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinifera]
           gi|297744725|emb|CBI37987.3| unnamed protein product
           [Vitis vinifera]
          Length = 969

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/74 (47%), Positives = 42/74 (56%)
 Frame = +3

Query: 6   PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185
           PD PS W    D   SR   L +S SCRA+LM GS SP   K E+  +TPPSG EKDF G
Sbjct: 625 PDEPSPWALDADTPSSRSLTLTRSWSCRANLMTGSSSPC-EKVEQRLSTPPSGFEKDFPG 683

Query: 186 KLRDIQRKFATSNY 227
           +    +R+    NY
Sbjct: 684 RPESFRRRHPPLNY 697


>emb|CBI17403.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/110 (34%), Positives = 49/110 (44%)
 Frame = +3

Query: 6   PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185
           P   S W   ++ S  R   L +SRSC+AS M  S SP   K EK+  TP +  EKDF G
Sbjct: 626 PQEFSPWLLEKENSSCRSLKLTRSRSCKASFMYCSSSPWFEKEEKDKYTPSNVFEKDFIG 685

Query: 186 KLRDIQRKFATSNYDXXXXXXXXXXXXXXXXXDLTDDSRTHPVRTSSQED 335
           +    Q+K A+ NYD                    D  +   V TS+ ED
Sbjct: 686 RPEGFQKKLASLNYDTEIDKLSRKGGQTFRGSSSVDQLKEQVVTTSTDED 735


>ref|XP_003631897.1| PREDICTED: uncharacterized protein LOC100854194 [Vitis vinifera]
          Length = 960

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/110 (34%), Positives = 49/110 (44%)
 Frame = +3

Query: 6   PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185
           P   S W   ++ S  R   L +SRSC+AS M  S SP   K EK+  TP +  EKDF G
Sbjct: 626 PQEFSPWLLEKENSSCRSLKLTRSRSCKASFMYCSSSPWFEKEEKDKYTPSNVFEKDFIG 685

Query: 186 KLRDIQRKFATSNYDXXXXXXXXXXXXXXXXXDLTDDSRTHPVRTSSQED 335
           +    Q+K A+ NYD                    D  +   V TS+ ED
Sbjct: 686 RPEGFQKKLASLNYDTEIDKLSRKGGQTFRGSSSVDQLKEQVVTTSTDED 735


>ref|XP_002313758.1| predicted protein [Populus trichocarpa] gi|222850166|gb|EEE87713.1|
           predicted protein [Populus trichocarpa]
          Length = 945

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/110 (32%), Positives = 49/110 (44%)
 Frame = +3

Query: 6   PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185
           PD  S      D+S SR   L +SRSCR + MN   SP   KAE+   TPP+GS K F+G
Sbjct: 593 PDESSPQSSAADMSTSRNLNLTRSRSCRENFMNDP-SPGFEKAEQIDGTPPNGSGKKFTG 651

Query: 186 KLRDIQRKFATSNYDXXXXXXXXXXXXXXXXXDLTDDSRTHPVRTSSQED 335
           +    +RK    ++                    TDD R   + T + E+
Sbjct: 652 RPAGPRRKIPPLDFGANATILSRNDSQSSLGSACTDDFRARSIGTCADEE 701


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