BLASTX nr result
ID: Coptis25_contig00040035
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00040035 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250... 66 3e-09 emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinife... 66 3e-09 emb|CBI17403.3| unnamed protein product [Vitis vinifera] 60 2e-07 ref|XP_003631897.1| PREDICTED: uncharacterized protein LOC100854... 60 2e-07 ref|XP_002313758.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250389 [Vitis vinifera] Length = 957 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/74 (47%), Positives = 42/74 (56%) Frame = +3 Query: 6 PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185 PD PS W D SR L +S SCRA+LM GS SP K E+ +TPPSG EKDF G Sbjct: 625 PDEPSPWALDADTPSSRSLTLTRSWSCRANLMTGSSSPC-EKVEQRLSTPPSGFEKDFPG 683 Query: 186 KLRDIQRKFATSNY 227 + +R+ NY Sbjct: 684 RPESFRRRHPPLNY 697 >emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinifera] gi|297744725|emb|CBI37987.3| unnamed protein product [Vitis vinifera] Length = 969 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/74 (47%), Positives = 42/74 (56%) Frame = +3 Query: 6 PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185 PD PS W D SR L +S SCRA+LM GS SP K E+ +TPPSG EKDF G Sbjct: 625 PDEPSPWALDADTPSSRSLTLTRSWSCRANLMTGSSSPC-EKVEQRLSTPPSGFEKDFPG 683 Query: 186 KLRDIQRKFATSNY 227 + +R+ NY Sbjct: 684 RPESFRRRHPPLNY 697 >emb|CBI17403.3| unnamed protein product [Vitis vinifera] Length = 973 Score = 59.7 bits (143), Expect = 2e-07 Identities = 38/110 (34%), Positives = 49/110 (44%) Frame = +3 Query: 6 PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185 P S W ++ S R L +SRSC+AS M S SP K EK+ TP + EKDF G Sbjct: 626 PQEFSPWLLEKENSSCRSLKLTRSRSCKASFMYCSSSPWFEKEEKDKYTPSNVFEKDFIG 685 Query: 186 KLRDIQRKFATSNYDXXXXXXXXXXXXXXXXXDLTDDSRTHPVRTSSQED 335 + Q+K A+ NYD D + V TS+ ED Sbjct: 686 RPEGFQKKLASLNYDTEIDKLSRKGGQTFRGSSSVDQLKEQVVTTSTDED 735 >ref|XP_003631897.1| PREDICTED: uncharacterized protein LOC100854194 [Vitis vinifera] Length = 960 Score = 59.7 bits (143), Expect = 2e-07 Identities = 38/110 (34%), Positives = 49/110 (44%) Frame = +3 Query: 6 PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185 P S W ++ S R L +SRSC+AS M S SP K EK+ TP + EKDF G Sbjct: 626 PQEFSPWLLEKENSSCRSLKLTRSRSCKASFMYCSSSPWFEKEEKDKYTPSNVFEKDFIG 685 Query: 186 KLRDIQRKFATSNYDXXXXXXXXXXXXXXXXXDLTDDSRTHPVRTSSQED 335 + Q+K A+ NYD D + V TS+ ED Sbjct: 686 RPEGFQKKLASLNYDTEIDKLSRKGGQTFRGSSSVDQLKEQVVTTSTDED 735 >ref|XP_002313758.1| predicted protein [Populus trichocarpa] gi|222850166|gb|EEE87713.1| predicted protein [Populus trichocarpa] Length = 945 Score = 56.6 bits (135), Expect = 2e-06 Identities = 36/110 (32%), Positives = 49/110 (44%) Frame = +3 Query: 6 PDPPSRWQEPEDLSMSRKTMLAKSRSCRASLMNGSFSPSPRKAEKNHNTPPSGSEKDFSG 185 PD S D+S SR L +SRSCR + MN SP KAE+ TPP+GS K F+G Sbjct: 593 PDESSPQSSAADMSTSRNLNLTRSRSCRENFMNDP-SPGFEKAEQIDGTPPNGSGKKFTG 651 Query: 186 KLRDIQRKFATSNYDXXXXXXXXXXXXXXXXXDLTDDSRTHPVRTSSQED 335 + +RK ++ TDD R + T + E+ Sbjct: 652 RPAGPRRKIPPLDFGANATILSRNDSQSSLGSACTDDFRARSIGTCADEE 701