BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040003
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885655.1| AAA-type ATPase family protein [Arabidopsis ...   118   4e-25
ref|NP_566752.1| AAA-type ATPase family protein / ankyrin repeat...   118   4e-25
dbj|BAB02004.1| unnamed protein product [Arabidopsis thaliana]        118   4e-25
ref|XP_003534199.1| PREDICTED: protein CbxX, chromosomal-like [G...   118   6e-25
ref|XP_003528921.1| PREDICTED: protein CbxX, chromosomal-like [G...   117   7e-25

>ref|XP_002885655.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331495|gb|EFH61914.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 497

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/81 (75%), Positives = 69/81 (85%)
 Frame = -3

Query: 244 DEAYRLMLPVPKATNNDFGLEALEEIMSVMDRGNIVVIFAGYSEPMKRVISSNEGFSRRV 65
           DEAYRL +P+ KA + D+GLEALEEIMSVMD G IVVIFAGYSEPMKRVI+SNEGF RRV
Sbjct: 331 DEAYRL-IPMQKADDKDYGLEALEEIMSVMDTGKIVVIFAGYSEPMKRVIASNEGFCRRV 389

Query: 64  TKSFVFDDLSNEELAQIVHVK 2
           TK F F D S +ELAQI+H+K
Sbjct: 390 TKFFNFSDFSAKELAQILHIK 410


>ref|NP_566752.1| AAA-type ATPase family protein / ankyrin repeat family protein
           [Arabidopsis thaliana]
           gi|13507553|gb|AAK28639.1|AF360342_1 putative rubisco
           expression protein [Arabidopsis thaliana]
           gi|15293291|gb|AAK93756.1| putative rubisco expression
           protein [Arabidopsis thaliana]
           gi|332643395|gb|AEE76916.1| AAA-type ATPase family
           protein / ankyrin repeat family protein [Arabidopsis
           thaliana]
          Length = 481

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/81 (75%), Positives = 69/81 (85%)
 Frame = -3

Query: 244 DEAYRLMLPVPKATNNDFGLEALEEIMSVMDRGNIVVIFAGYSEPMKRVISSNEGFSRRV 65
           DEAYRL +P+ KA + D+GLEALEEIMSVMD G IVVIFAGYSEPMKRVI+SNEGF RRV
Sbjct: 315 DEAYRL-IPMQKADDKDYGLEALEEIMSVMDTGKIVVIFAGYSEPMKRVIASNEGFCRRV 373

Query: 64  TKSFVFDDLSNEELAQIVHVK 2
           TK F F D S +ELAQI+H+K
Sbjct: 374 TKFFNFSDFSAKELAQILHIK 394


>dbj|BAB02004.1| unnamed protein product [Arabidopsis thaliana]
          Length = 468

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/81 (75%), Positives = 69/81 (85%)
 Frame = -3

Query: 244 DEAYRLMLPVPKATNNDFGLEALEEIMSVMDRGNIVVIFAGYSEPMKRVISSNEGFSRRV 65
           DEAYRL +P+ KA + D+GLEALEEIMSVMD G IVVIFAGYSEPMKRVI+SNEGF RRV
Sbjct: 302 DEAYRL-IPMQKADDKDYGLEALEEIMSVMDTGKIVVIFAGYSEPMKRVIASNEGFCRRV 360

Query: 64  TKSFVFDDLSNEELAQIVHVK 2
           TK F F D S +ELAQI+H+K
Sbjct: 361 TKFFNFSDFSAKELAQILHIK 381


>ref|XP_003534199.1| PREDICTED: protein CbxX, chromosomal-like [Glycine max]
          Length = 484

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/81 (72%), Positives = 71/81 (87%)
 Frame = -3

Query: 244 DEAYRLMLPVPKATNNDFGLEALEEIMSVMDRGNIVVIFAGYSEPMKRVISSNEGFSRRV 65
           DEAYRL +P+ K+ + D+GLEALEEIMSVMD G IVVIFAGYS+PMKRVI+SNEGF RRV
Sbjct: 318 DEAYRL-IPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYSKPMKRVITSNEGFCRRV 376

Query: 64  TKSFVFDDLSNEELAQIVHVK 2
           TK F F+D ++EELAQI+H+K
Sbjct: 377 TKFFQFNDFNSEELAQILHIK 397


>ref|XP_003528921.1| PREDICTED: protein CbxX, chromosomal-like [Glycine max]
          Length = 480

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = -3

Query: 244 DEAYRLMLPVPKATNNDFGLEALEEIMSVMDRGNIVVIFAGYSEPMKRVISSNEGFSRRV 65
           DEAYRL +P+ K+ + D+GLEALEEIMSVMD G IVVIFAGY EPMKRVI+SNEGF RRV
Sbjct: 314 DEAYRL-IPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYCEPMKRVIASNEGFCRRV 372

Query: 64  TKSFVFDDLSNEELAQIVHVK 2
           TK F F+D ++EELAQI+H+K
Sbjct: 373 TKFFQFNDFNSEELAQILHIK 393