BLASTX nr result

ID: Coptis25_contig00040001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00040001
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36874.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_002268302.1| PREDICTED: poly [ADP-ribose] polymerase 2-A-...   367   1e-99
ref|XP_004165914.1| PREDICTED: poly [ADP-ribose] polymerase 2-li...   343   1e-92
ref|XP_004136022.1| PREDICTED: poly [ADP-ribose] polymerase 2-li...   342   3e-92
gb|EEC70601.1| hypothetical protein OsI_01833 [Oryza sativa Indi...   338   4e-91

>emb|CBI36874.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  370 bits (949), Expect = e-100
 Identities = 178/226 (78%), Positives = 197/226 (87%)
 Frame = +1

Query: 1   GGAVLDQWLPDHIKTQYHVLQYGEEIYDAMLNQTNVGDNNNKFYVIQALESDDGLTFMVY 180
           GGAVLDQWLPD IK  YHVL+ G++IYDAMLNQTNVGDNNNKFYVIQ LESDDG  FM Y
Sbjct: 57  GGAVLDQWLPDQIKANYHVLEQGDDIYDAMLNQTNVGDNNNKFYVIQVLESDDGDKFMAY 116

Query: 181 CRWGRVGVKGQDKLHGPYTSRDGAIKEFETKFHVKTKNEWSDRKAFVCHPKLYTWLEMDY 360
            RWGRVGVKGQDKL GP+TSR+ AI EFE KF+ KTKN WS+RK F+ HPK YTWLEMDY
Sbjct: 117 ARWGRVGVKGQDKLQGPFTSRESAIHEFEQKFYAKTKNYWSNRKDFIGHPKCYTWLEMDY 176

Query: 361 NEMEKESKVPKKVNDLIQPRETKLESRIANFVSLICNVSMMKQQMMEIGYNAEKLPLGKL 540
           N+ E++S V +K N  IQ RETKLE RIA F+SLIC+VSMMKQQMMEIGYNA+KLPLGKL
Sbjct: 177 NDKEQKSDVQEKPNSTIQLRETKLEPRIAKFISLICDVSMMKQQMMEIGYNADKLPLGKL 236

Query: 541 SKSTILKGYDVLKRISDVITQLNRKTLEKLSGEFYTVIPHDFGFQK 678
           SKSTI KGYDVLKRI+DVI+Q NRKTLE+LSGEFYTVIPHDFGF+K
Sbjct: 237 SKSTISKGYDVLKRIADVISQSNRKTLEQLSGEFYTVIPHDFGFKK 282


>ref|XP_002268302.1| PREDICTED: poly [ADP-ribose] polymerase 2-A-like [Vitis vinifera]
          Length = 591

 Score =  367 bits (942), Expect = 1e-99
 Identities = 179/226 (79%), Positives = 197/226 (87%)
 Frame = +1

Query: 1   GGAVLDQWLPDHIKTQYHVLQYGEEIYDAMLNQTNVGDNNNKFYVIQALESDDGLTFMVY 180
           GGAVLDQWLPD IK  YHVL+ G++IYDAMLNQTNVGDNNNKFYVIQ LESDDG  FM Y
Sbjct: 101 GGAVLDQWLPDQIKANYHVLEQGDDIYDAMLNQTNVGDNNNKFYVIQVLESDDGDKFMAY 160

Query: 181 CRWGRVGVKGQDKLHGPYTSRDGAIKEFETKFHVKTKNEWSDRKAFVCHPKLYTWLEMDY 360
            RWGRVGVKGQDKL GP+TSR+ AI EFE KF+ KTKN WS+RK F+ HPK YTWLEMDY
Sbjct: 161 ARWGRVGVKGQDKLQGPFTSRESAIHEFEQKFYAKTKNYWSNRKDFIGHPKCYTWLEMDY 220

Query: 361 NEMEKESKVPKKVNDLIQPRETKLESRIANFVSLICNVSMMKQQMMEIGYNAEKLPLGKL 540
           N+ E++S V KK N  IQ RETKLE RIA F+SLIC+VSMMKQQMMEIGYNA+KLPLGKL
Sbjct: 221 NDKEQKSDV-KKPNSTIQLRETKLEPRIAKFISLICDVSMMKQQMMEIGYNADKLPLGKL 279

Query: 541 SKSTILKGYDVLKRISDVITQLNRKTLEKLSGEFYTVIPHDFGFQK 678
           SKSTI KGYDVLKRI+DVI+Q NRKTLE+LSGEFYTVIPHDFGF+K
Sbjct: 280 SKSTISKGYDVLKRIADVISQSNRKTLEQLSGEFYTVIPHDFGFKK 325


>ref|XP_004165914.1| PREDICTED: poly [ADP-ribose] polymerase 2-like [Cucumis sativus]
          Length = 637

 Score =  343 bits (881), Expect = 1e-92
 Identities = 171/228 (75%), Positives = 190/228 (83%), Gaps = 2/228 (0%)
 Frame = +1

Query: 1   GGAVLDQWLPDHIKTQYHVLQYGEEIYDAMLNQTNVGDNNNKFYVIQALESDDGLTFMVY 180
           G AVLD WLPD IKTQYHVL+ G+EIYDAMLNQTNV +NNNKFYVIQ LESD G T+MVY
Sbjct: 145 GSAVLDLWLPDQIKTQYHVLEVGDEIYDAMLNQTNVRNNNNKFYVIQVLESDGGGTYMVY 204

Query: 181 CRWGRVGVKGQDKLHGPYTSRDGAIKEFETKFHVKTKNEWSDRKAFVCHPKLYTWLEMDY 360
            RWGRVGVKGQD +  PYTS++ AI EFE KF  KTKN WS+RK F+CHPK YTWLEMDY
Sbjct: 205 SRWGRVGVKGQDNIR-PYTSKELAIHEFEQKFLAKTKNNWSNRKEFICHPKSYTWLEMDY 263

Query: 361 NEMEKE--SKVPKKVNDLIQPRETKLESRIANFVSLICNVSMMKQQMMEIGYNAEKLPLG 534
           +E EK+  S + +     IQPRET+L+  IANF+SLICNVSMMKQ MMEIGYNAEKLPLG
Sbjct: 264 SESEKDLSSNMERAPTSEIQPRETQLDPCIANFISLICNVSMMKQHMMEIGYNAEKLPLG 323

Query: 535 KLSKSTILKGYDVLKRISDVITQLNRKTLEKLSGEFYTVIPHDFGFQK 678
           KLSKSTILKGYDVLKRI+DVI   NR  LE+LSGEFYTVIPHDFGF+K
Sbjct: 324 KLSKSTILKGYDVLKRIADVIGLSNRSVLEQLSGEFYTVIPHDFGFKK 371


>ref|XP_004136022.1| PREDICTED: poly [ADP-ribose] polymerase 2-like [Cucumis sativus]
          Length = 637

 Score =  342 bits (878), Expect = 3e-92
 Identities = 170/228 (74%), Positives = 190/228 (83%), Gaps = 2/228 (0%)
 Frame = +1

Query: 1   GGAVLDQWLPDHIKTQYHVLQYGEEIYDAMLNQTNVGDNNNKFYVIQALESDDGLTFMVY 180
           G AVLD WLPD +KTQYHVL+ G+EIYDAMLNQTNV +NNNKFYVIQ LESD G T+MVY
Sbjct: 145 GSAVLDLWLPDQMKTQYHVLEVGDEIYDAMLNQTNVRNNNNKFYVIQVLESDGGGTYMVY 204

Query: 181 CRWGRVGVKGQDKLHGPYTSRDGAIKEFETKFHVKTKNEWSDRKAFVCHPKLYTWLEMDY 360
            RWGRVGVKGQD +  PYTS++ AI EFE KF  KTKN WS+RK F+CHPK YTWLEMDY
Sbjct: 205 SRWGRVGVKGQDNIR-PYTSKELAIHEFEQKFLAKTKNNWSNRKEFICHPKSYTWLEMDY 263

Query: 361 NEMEKE--SKVPKKVNDLIQPRETKLESRIANFVSLICNVSMMKQQMMEIGYNAEKLPLG 534
           +E EK+  S + +     IQPRET+L+  IANF+SLICNVSMMKQ MMEIGYNAEKLPLG
Sbjct: 264 SESEKDLSSNMERAPTSEIQPRETQLDPCIANFISLICNVSMMKQHMMEIGYNAEKLPLG 323

Query: 535 KLSKSTILKGYDVLKRISDVITQLNRKTLEKLSGEFYTVIPHDFGFQK 678
           KLSKSTILKGYDVLKRI+DVI   NR  LE+LSGEFYTVIPHDFGF+K
Sbjct: 324 KLSKSTILKGYDVLKRIADVIGLSNRSVLEQLSGEFYTVIPHDFGFKK 371


>gb|EEC70601.1| hypothetical protein OsI_01833 [Oryza sativa Indica Group]
          Length = 1627

 Score =  338 bits (868), Expect = 4e-91
 Identities = 164/227 (72%), Positives = 195/227 (85%), Gaps = 1/227 (0%)
 Frame = +1

Query: 1   GGAVLDQWLPDHIKTQYHVLQYGEEIYDAMLNQTNVGDNNNKFYVIQALESDDGLTFMVY 180
           G AVLDQ +PDHIK  YHVLQ G+EIYDA +NQTNVGDNNNKFY+IQALESD G +FMVY
Sbjct: 164 GAAVLDQHIPDHIKMTYHVLQVGDEIYDATMNQTNVGDNNNKFYIIQALESDAGGSFMVY 223

Query: 181 CRWGRVGVKGQDKLHGPYTSRDGAIKEFETKFHVKTKNEWSDRKAFVCHPKLYTWLEMDY 360
            RWGRVG +GQDKLHGP++SR+ AI EFE KFH KT N WSDRK+F C+ + YTWLEMDY
Sbjct: 224 NRWGRVGARGQDKLHGPFSSREQAIYEFEGKFHSKTNNHWSDRKSFECYARKYTWLEMDY 283

Query: 361 NEMEKESKVPKKVN-DLIQPRETKLESRIANFVSLICNVSMMKQQMMEIGYNAEKLPLGK 537
            E ++E+   KKV+    Q +ETKLE+RIA+F+SLICN+SMMKQQM+EIGYNA+KLPLGK
Sbjct: 284 GEADRETN--KKVSPSTDQIKETKLETRIASFISLICNISMMKQQMVEIGYNADKLPLGK 341

Query: 538 LSKSTILKGYDVLKRISDVITQLNRKTLEKLSGEFYTVIPHDFGFQK 678
           LSKSTI KGYDVLKRIS+VI++ +R+ LE+L+GEFYTVIPHDFGF+K
Sbjct: 342 LSKSTIFKGYDVLKRISNVISRADRRQLEQLTGEFYTVIPHDFGFKK 388


Top