BLASTX nr result

ID: Coptis25_contig00039997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039997
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|2...   135   9e-30
gb|ABK93232.1| unknown [Populus trichocarpa]                          134   3e-29
ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|2...   132   6e-29
ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|2...   129   5e-28
ref|XP_002514878.1| conserved hypothetical protein [Ricinus comm...   123   4e-26

>ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|222845111|gb|EEE82658.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  135 bits (340), Expect = 9e-30
 Identities = 87/222 (39%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
 Frame = +3

Query: 30  MDPI-KIEKLQAMNKYKKSSTQFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFV 206
           MD I K +K+QAM+ +K    QF   L+ +   AL CS+LC SP W PSL +S+K FLF+
Sbjct: 1   MDSIRKAKKIQAMHSFKN---QFYYNLMFHSFLALTCSLLCSSPLWFPSLCSSMKHFLFL 57

Query: 207 SVPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEIYDEYVKRSSSLRRHPSS 386
           S+PN    +  PKCLFI+ NVIV+FL+GES+ + S+SSP   IYD+YV+RS SL R  S+
Sbjct: 58  SLPNKLSSYFGPKCLFILVNVIVVFLVGESRLVGSQSSPVGGIYDDYVERSRSL-RGVST 116

Query: 387 EEIEVKETKLEVCLVEEN--ENKVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 560
            + + +++K E+   ++   ++K                                     
Sbjct: 117 HQDKAEDSKPEIDQDQQTNIQDKEVVVKAEDDKEVTELTNEGDKDVHEEAGVEDDQHEEK 176

Query: 561 XXXXXXXLGLPTEELNRKVEDFIEKINNQRKLEARQLLVCSK 686
                   GLP EELNR+VE+FI ++N QR LE  Q LVC K
Sbjct: 177 DIIEEEDSGLPPEELNRRVEEFIARVNKQRWLEG-QFLVCCK 217


>gb|ABK93232.1| unknown [Populus trichocarpa]
          Length = 203

 Score =  134 bits (336), Expect = 3e-29
 Identities = 83/218 (38%), Positives = 116/218 (53%), Gaps = 1/218 (0%)
 Frame = +3

Query: 30  MDPIKIEKLQAMNKYKKSSTQFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFVS 209
           MD IK+ ++ A+NK KK   Q L    LY  T L C++ C SPFW PSL+ S+K FLFVS
Sbjct: 1   MDLIKLREIHAINKSKKH--QLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVS 58

Query: 210 VPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEI-YDEYVKRSSSLRRHPSS 386
           +P    + ++PK +FIV N+I+  L+GESK+ +S S  AT++ YDEY+ +  SL+   +S
Sbjct: 59  LPKLSSILLSPKFIFIVGNLIIFVLVGESKYFTSNSPSATDVYYDEYIDQKKSLQTTSAS 118

Query: 387 EEIEVKETKLEVCLVEENENKVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 566
            E E KE K+E    +E ++K                                       
Sbjct: 119 VE-EKKEVKMEESF-KEKQSKTCE------------SGENNGGKGLCEGNLKVHKEREDL 164

Query: 567 XXXXXLGLPTEELNRKVEDFIEKINNQRKLEARQLLVC 680
                  LPTEEL ++ +DFI ++N QR LEAR LLVC
Sbjct: 165 EGEEEFSLPTEELKKRADDFIARVNRQRMLEAR-LLVC 201


>ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|222868713|gb|EEF05844.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  132 bits (333), Expect = 6e-29
 Identities = 83/218 (38%), Positives = 115/218 (52%), Gaps = 1/218 (0%)
 Frame = +3

Query: 30  MDPIKIEKLQAMNKYKKSSTQFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFVS 209
           MD IK+ ++ A+NK KK   Q L    LY  T L C++ C SPFW PSL+ S+K FLFVS
Sbjct: 1   MDLIKLREIHAINKSKKH--QLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVS 58

Query: 210 VPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEI-YDEYVKRSSSLRRHPSS 386
           +P    + ++PK +FIV N+I+  L+GESK+ +S S  AT + YDEY+ +  SL+   +S
Sbjct: 59  LPKLSSILLSPKFIFIVGNLIIFVLVGESKYFTSNSPSATAVYYDEYIDQKKSLQTTSAS 118

Query: 387 EEIEVKETKLEVCLVEENENKVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 566
            E E KE K+E    +E ++K                                       
Sbjct: 119 VE-EKKEVKMEESF-KEKQSKTCE------------SGENNGGKGLCEGNLKVHKEREDL 164

Query: 567 XXXXXLGLPTEELNRKVEDFIEKINNQRKLEARQLLVC 680
                  LPTEEL ++ +DFI ++N QR LEAR LLVC
Sbjct: 165 EGEEEFSLPTEELKKRADDFIARVNRQRMLEAR-LLVC 201


>ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|222858818|gb|EEE96365.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  129 bits (325), Expect = 5e-28
 Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
 Frame = +3

Query: 30  MDPIKIEKLQAMNKYKKSSTQFLKALILYCSTALICSILCLSPFWLPSLYASIKAFLFVS 209
           MD IK+ +++A+NK KK   Q L    LY    L C++ C SPFW P L+ S+K FLF S
Sbjct: 1   MDLIKLREIRAVNKSKKH--QLLDNFFLYSLIVLACTLFCSSPFWFPCLFDSVKLFLFGS 58

Query: 210 VPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEI-YDEYVKRSSSLRRHPSS 386
            P  G +F++PK +FIV N+I+  L+GESKF ++ S PAT++ YDEY+    SL+   S 
Sbjct: 59  PPKLGSVFLSPKFIFIVGNLIIFVLVGESKFFTTNSPPATDVYYDEYIDHKRSLQTASSV 118

Query: 387 EEIEVKETKLEVCLVEENENKVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 566
           E+      K E  + + ++ K +R                                    
Sbjct: 119 EQ------KKETNMGKSSKEKRSR----------TCENGKKNEGKGMAEANLKVHEERKD 162

Query: 567 XXXXXLGLPTEELNRKVEDFIEKINNQRKLEAR 665
                L LPTEELN++ +DFI ++N QR LEAR
Sbjct: 163 LQEDALSLPTEELNKRADDFIARVNRQRMLEAR 195


>ref|XP_002514878.1| conserved hypothetical protein [Ricinus communis]
           gi|223545929|gb|EEF47432.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score =  123 bits (309), Expect = 4e-26
 Identities = 66/135 (48%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
 Frame = +3

Query: 42  KIEKLQAMNKYKKSSTQFLKALILYCST--ALICSILCLSPFWLPSLYASIKAFLFVSVP 215
           K + +QAMN YK   TQFL  LI++  +  AL CS+ C  P+W PSLY+SIK F F+S+P
Sbjct: 6   KAKNIQAMNSYK---TQFLHNLIIHLLSVIALTCSVFCFYPYWFPSLYSSIKEFQFLSLP 62

Query: 216 NFGVLFINPKCLFIVSNVIVIFLIGESKFLSS-KSSPATEIYDEYVKRSSSLRRHPSSEE 392
           N      +PKCLF+V N+IV+FL+GESK + S  SSP  +IYDEYV+RS SLR   +  +
Sbjct: 63  NTCTSIFSPKCLFVVVNIIVVFLVGESKLVGSHSSSPTNKIYDEYVQRSRSLRGISTLLQ 122

Query: 393 IEVKETKLEVCLVEE 437
            +  ++KL++ L E+
Sbjct: 123 EKAVQSKLDLNLDED 137


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