BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039987
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56
emb|CBI25399.3| unnamed protein product [Vitis vinifera]              201   7e-50
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
gb|ABK26521.1| unknown [Picea sitchensis]                             146   2e-33

>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Vitis vinifera]
          Length = 820

 Score =  223 bits (567), Expect = 2e-56
 Identities = 102/136 (75%), Positives = 121/136 (88%)
 Frame = +1

Query: 1    EFINNMPIEPTDMIWQTLLAACRVHGNIELGEIAAKKILSVSPQYSATYVLLSNTYIEKG 180
            EFI  MP+EP +M+WQTLL  CRVHGN+ELGEIAA+KILS+ P+YSATYVLLSNTYIE G
Sbjct: 685  EFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETG 744

Query: 181  SVKDGLSLRNVMRDRGVKKEPGFSWISVRGAAHKFFSGDQRHPQREEINAKLAELREKMK 360
            S +DGLSLRNVM+D+GVKKEPG+SWISV+G  HKF+SGDQ+HPQ++EI  KL ELREK+K
Sbjct: 745  SYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 804

Query: 361  AMGYVPDLRYVLQDVE 408
            AMGYVPDLRYVL + +
Sbjct: 805  AMGYVPDLRYVLNNAD 820


>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  201 bits (510), Expect = 7e-50
 Identities = 92/122 (75%), Positives = 109/122 (89%)
 Frame = +1

Query: 1   EFINNMPIEPTDMIWQTLLAACRVHGNIELGEIAAKKILSVSPQYSATYVLLSNTYIEKG 180
           EFI  MP+EP +M+WQTLL  CRVHGN+ELGEIAA+KILS+ P+YSATYVLLSNTYIE G
Sbjct: 631 EFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETG 690

Query: 181 SVKDGLSLRNVMRDRGVKKEPGFSWISVRGAAHKFFSGDQRHPQREEINAKLAELREKMK 360
           S +DGLSLRNVM+D+GVKKEPG+SWISV+G  HKF+SGDQ+HPQ++EI  KL ELREK+K
Sbjct: 691 SYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750

Query: 361 AM 366
           AM
Sbjct: 751 AM 752


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Cucumis sativus]
          Length = 766

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/132 (66%), Positives = 111/132 (84%)
 Frame = +1

Query: 1    EFINNMPIEPTDMIWQTLLAACRVHGNIELGEIAAKKILSVSPQYSATYVLLSNTYIEKG 180
            EFI+ MP+EP +M+WQTLL ACRVHGN+ELGE+AA+KILS   + SATYVLLSNTYIE G
Sbjct: 635  EFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESG 694

Query: 181  SVKDGLSLRNVMRDRGVKKEPGFSWISVRGAAHKFFSGDQRHPQREEINAKLAELREKMK 360
            S KDGLSLR+VM+++GVKKEPG SWISV G  HKF++GDQ+HP++++I AKL EL+ K+ 
Sbjct: 695  SYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLI 754

Query: 361  AMGYVPDLRYVL 396
            ++  VPDL Y L
Sbjct: 755  SLDDVPDLSYEL 766


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Cucumis sativus]
          Length = 766

 Score =  187 bits (476), Expect = 6e-46
 Identities = 87/132 (65%), Positives = 111/132 (84%)
 Frame = +1

Query: 1    EFINNMPIEPTDMIWQTLLAACRVHGNIELGEIAAKKILSVSPQYSATYVLLSNTYIEKG 180
            EFI+ MP+EP +M+WQTLL ACRVHGN+ELGE+AA+KILS   + SATYVLLSNTYIE G
Sbjct: 635  EFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESG 694

Query: 181  SVKDGLSLRNVMRDRGVKKEPGFSWISVRGAAHKFFSGDQRHPQREEINAKLAELREKMK 360
            S KDGLSLR++M+++GVKKEPG SWISV G  HKF++GDQ+HP++++I AKL EL+ K+ 
Sbjct: 695  SYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLI 754

Query: 361  AMGYVPDLRYVL 396
            ++  VPDL Y L
Sbjct: 755  SLDDVPDLSYEL 766


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/135 (51%), Positives = 88/135 (65%)
 Frame = +1

Query: 4   FINNMPIEPTDMIWQTLLAACRVHGNIELGEIAAKKILSVSPQYSATYVLLSNTYIEKGS 183
           FIN MP+EP   +W +LL ACRVHGNIEL E A ++++ ++P+   TYVLLSN Y   G 
Sbjct: 157 FINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGR 216

Query: 184 VKDGLSLRNVMRDRGVKKEPGFSWISVRGAAHKFFSGDQRHPQREEINAKLAELREKMKA 363
             D   +R +M+DR VKKEPG SWI V+   H F  GD  HPQ EEI   L  L  +MKA
Sbjct: 217 WDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKA 276

Query: 364 MGYVPDLRYVLQDVE 408
            GY+P+  +VL DVE
Sbjct: 277 AGYIPNTNFVLHDVE 291