BLASTX nr result

ID: Coptis25_contig00039952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039952
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38717.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002266229.1| PREDICTED: protein NDR1-like isoform 1 [Viti...   119   3e-25
emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]   119   3e-25
ref|XP_003633928.1| PREDICTED: protein NDR1-like isoform 2 [Viti...   118   4e-25
ref|XP_003521826.1| PREDICTED: protein NDR1-like [Glycine max]        115   5e-24

>emb|CBI38717.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/107 (59%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
 Frame = -3

Query: 302 TTMTNKGMA-------PNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAI 144
           TT T  G+        P D RR   TFI I LLLAG+TAL+VWLVYRP +P FTV+G AI
Sbjct: 39  TTQTEMGVEKPPSPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAI 98

Query: 143 YDLNXXXXXXXXXXXXXTVVTRNPNKRVSIYYDHLSAYVSYRNQQIT 3
           YDLN             T+VTRNPNKRVSIYYD LSA+VSYRNQ IT
Sbjct: 99  YDLNTTSPPLISTNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAIT 145


>ref|XP_002266229.1| PREDICTED: protein NDR1-like isoform 1 [Vitis vinifera]
          Length = 219

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/107 (59%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
 Frame = -3

Query: 302 TTMTNKGMA-------PNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAI 144
           TT T  G+        P D RR   TFI I LLLAG+TAL+VWLVYRP +P FTV+G AI
Sbjct: 13  TTQTEMGVEKPPSPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAI 72

Query: 143 YDLNXXXXXXXXXXXXXTVVTRNPNKRVSIYYDHLSAYVSYRNQQIT 3
           YDLN             T+VTRNPNKRVSIYYD LSA+VSYRNQ IT
Sbjct: 73  YDLNTTSPPLISTNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAIT 119


>emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
          Length = 991

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/107 (59%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
 Frame = -3

Query: 302  TTMTNKGMA-------PNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAI 144
            TT T  G+        P D RR   TFI I LLLAG+TAL+VWLVYRP +P FTV+G AI
Sbjct: 785  TTQTEMGVEKPPSPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAI 844

Query: 143  YDLNXXXXXXXXXXXXXTVVTRNPNKRVSIYYDHLSAYVSYRNQQIT 3
            YDLN             T+VTRNPNKRVSIYYD LSA+VSYRNQ IT
Sbjct: 845  YDLNTTSPPLISTNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAIT 891


>ref|XP_003633928.1| PREDICTED: protein NDR1-like isoform 2 [Vitis vinifera]
          Length = 202

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/91 (65%), Positives = 66/91 (72%)
 Frame = -3

Query: 275 PNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAIYDLNXXXXXXXXXXXX 96
           P D RR   TFI I LLLAG+TAL+VWLVYRP +P FTV+G AIYDLN            
Sbjct: 12  PKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLISTNMQ 71

Query: 95  XTVVTRNPNKRVSIYYDHLSAYVSYRNQQIT 3
            T+VTRNPNKRVSIYYD LSA+VSYRNQ IT
Sbjct: 72  FTIVTRNPNKRVSIYYDRLSAFVSYRNQAIT 102


>ref|XP_003521826.1| PREDICTED: protein NDR1-like [Glycine max]
          Length = 197

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = -3

Query: 290 NKGMAPNDMRRFVYTFIVIFLLLAGVTALIVWLVYRPHKPHFTVVGAAIYDLNXXXXXXX 111
           +K     D RR V T I IFLLLAGVT L++WLVYRPHKP FTV+GAA+YDLN       
Sbjct: 2   SKDKVSGDPRRAVCTGITIFLLLAGVTLLVLWLVYRPHKPRFTVIGAAVYDLNTTTPPLM 61

Query: 110 XXXXXXTVVTRNPNKRVSIYYDHLSAYVSYRNQQIT 3
                 +V+ +NPN+RVSIYYD  SA+VSYRNQ IT
Sbjct: 62  STTVQFSVLIKNPNRRVSIYYDRFSAFVSYRNQAIT 97


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