BLASTX nr result
ID: Coptis25_contig00039935
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00039935 (511 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266989.1| PREDICTED: uncharacterized protein LOC100248... 64 2e-08 ref|XP_002329220.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002266989.1| PREDICTED: uncharacterized protein LOC100248425 [Vitis vinifera] gi|297736648|emb|CBI25519.3| unnamed protein product [Vitis vinifera] Length = 323 Score = 63.5 bits (153), Expect = 2e-08 Identities = 49/159 (30%), Positives = 65/159 (40%), Gaps = 15/159 (9%) Frame = -3 Query: 437 YPGNEEGFQLKDEGNGISLGTGNGSFSSQSHNQT-----ENYTQPQTQMSSVYDPRPNFY 273 Y G EEGF+L D +GI+L + S + + + PQT + Sbjct: 150 YSGKEEGFELMDHSSGITLAPADASTQAYPPQRPLAPLGQPQNPPQTNFPYSHPMPFPTN 209 Query: 272 GKQSSVGDPNYXXXXXXXXXXXPS----------HVGYLPTFLPRTDQLAGTWVNLXXXX 123 ++G P+Y S +VGY+PTFLPRTD L GT+VN+ Sbjct: 210 NSNPALGGPSYPSAGGTSYPPPRSPPPPPPPPPSNVGYIPTFLPRTDHLPGTYVNM---P 266 Query: 122 XXXXXXXXXXXPNFXXXXXXXXXXXXAVIFGDDFMSGFE 6 P F AVIFGDDFMSGF+ Sbjct: 267 PSGSGAGSSRGPGFGMGVGAGALAAGAVIFGDDFMSGFD 305 >ref|XP_002329220.1| predicted protein [Populus trichocarpa] gi|222871001|gb|EEF08132.1| predicted protein [Populus trichocarpa] Length = 314 Score = 56.6 bits (135), Expect = 2e-06 Identities = 51/156 (32%), Positives = 64/156 (41%), Gaps = 11/156 (7%) Frame = -3 Query: 437 YPGNEEGFQLKDEGNGISLGTGNGSFSSQSHNQTENYTQPQTQMSSV-YD---PRPNFYG 270 YPGNE G L D N I+L T + S + QP+ SSV Y+ P P Y Sbjct: 149 YPGNEGGIMLMDHNNKITLPTEGSGKAFPSELPLGSLRQPENHPSSVAYNHPLPYPANYS 208 Query: 269 KQSSVG-------DPNYXXXXXXXXXXXPSHVGYLPTFLPRTDQLAGTWVNLXXXXXXXX 111 S G P+Y PS+VGY+PT LP TD ++N+ Sbjct: 209 NPSVGGPSYPPAAGPSYQPSRTPPPPPPPSNVGYMPTILPNTD-----YINM--PSSVAA 261 Query: 110 XXXXXXXPNFXXXXXXXXXXXXAVIFGDDFMSGFEL 3 P AVIFGDDFMSGF++ Sbjct: 262 AGPRGPRPGLAMGVGAGALAAGAVIFGDDFMSGFDI 297