BLASTX nr result

ID: Coptis25_contig00039925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039925
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...    90   3e-16
ref|XP_002331998.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002525845.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|ADX31265.1| unknown [Triticum aestivum]                             82   8e-14

>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 46/106 (43%), Positives = 67/106 (63%)
 Frame = +1

Query: 16  ITWDDFTKTICGRFSDEGYENVVGEFNKLQQMGSMASYQEKFEELMPLILAKNRGLSEEY 195
           + W++F+K IC RF     +++V EFNKL Q G M  Y E+FEEL  L+ + N  L E Y
Sbjct: 164 LEWEEFSKAICSRFGSR--DDIVEEFNKLTQEGGMEEYVERFEELKSLMHSLNPLLPESY 221

Query: 196 FVSSFLSGLKEEIRNPMQIFSPTTLTHTILLVRLQESTLNSLAKKN 333
           ++SSF+SGLKE+I+  ++I  P TL       + QE + N LA+K+
Sbjct: 222 YISSFISGLKEDIKPMLKILKPGTLMTAFDQAKWQEESNNILARKS 267


>ref|XP_002331998.1| predicted protein [Populus trichocarpa] gi|222874766|gb|EEF11897.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/106 (41%), Positives = 66/106 (62%)
 Frame = +1

Query: 16  ITWDDFTKTICGRFSDEGYENVVGEFNKLQQMGSMASYQEKFEELMPLILAKNRGLSEEY 195
           + W++F++ IC RF +    ++V EFNKL   G +  Y E+FEEL  L+ + N  L E Y
Sbjct: 160 LEWEEFSRAICSRFGNRA--DIVEEFNKLTHEGGIEEYVERFEELKSLMHSLNSLLLESY 217

Query: 196 FVSSFLSGLKEEIRNPMQIFSPTTLTHTILLVRLQESTLNSLAKKN 333
           ++SSF+SGLKE+I+  ++I  P TL       + QE + N LA+KN
Sbjct: 218 YISSFISGLKEDIKPMLKILKPETLMKNFDQAKWQEESNNVLARKN 263


>ref|XP_002525845.1| conserved hypothetical protein [Ricinus communis]
           gi|223534850|gb|EEF36539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 41/104 (39%), Positives = 66/104 (63%)
 Frame = +1

Query: 22  WDDFTKTICGRFSDEGYENVVGEFNKLQQMGSMASYQEKFEELMPLILAKNRGLSEEYFV 201
           W+ F K +C RF      ++V E N++QQ+GS+ +YQE+FEEL  L+L  N    E YF+
Sbjct: 122 WEVFAKELCRRFGKVIVSDIVEESNRIQQVGSVINYQERFEELRSLMLKYNPMPDESYFM 181

Query: 202 SSFLSGLKEEIRNPMQIFSPTTLTHTILLVRLQESTLNSLAKKN 333
           SSF+SGL EEIR+ +++    TL+      +L E ++ ++ K++
Sbjct: 182 SSFVSGLNEEIRSMVKLLKLATLSQAYERAKLYEKSIEAMFKRH 225


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/106 (41%), Positives = 63/106 (59%)
 Frame = +1

Query: 16  ITWDDFTKTICGRFSDEGYENVVGEFNKLQQMGSMASYQEKFEELMPLILAKNRGLSEEY 195
           + W+ F+  IC RF +     +V EFNKL Q G +  Y E+FEEL  L+ + N  L E Y
Sbjct: 113 VDWEKFSGAICNRFGNR--TAIVEEFNKLMQEGDVDEYVERFEELKSLMHSLNSLLPESY 170

Query: 196 FVSSFLSGLKEEIRNPMQIFSPTTLTHTILLVRLQESTLNSLAKKN 333
           ++SSF+SGLKE+I+  ++I  P TL       + QE + N LA+ N
Sbjct: 171 YISSFISGLKEDIKPMLKILKPVTLMIAFDQAKWQEESNNVLARNN 216


>gb|ADX31265.1| unknown [Triticum aestivum]
          Length = 1231

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 40/106 (37%), Positives = 58/106 (54%)
 Frame = +1

Query: 19  TWDDFTKTICGRFSDEGYENVVGEFNKLQQMGSMASYQEKFEELMPLILAKNRGLSEEYF 198
           TW    + +C +F  E Y++ + +FN L+Q G++A Y  +FEELM  ILA N      YF
Sbjct: 217 TWASLCEALCHKFGREQYQSHLRQFNTLRQSGTVADYMTRFEELMHHILAHNPAFDSVYF 276

Query: 199 VSSFLSGLKEEIRNPMQIFSPTTLTHTILLVRLQESTLNSLAKKNY 336
            + FL GLK EIR  + +  P  L     L  LQE  + +L ++ Y
Sbjct: 277 TTQFLDGLKGEIRAVVMLHQPKDLDSAFSLATLQEELMEALPRREY 322


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