BLASTX nr result

ID: Coptis25_contig00039924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039924
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   252   2e-65
ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus comm...   252   2e-65
ref|XP_004138417.1| PREDICTED: clathrin heavy chain 1-like [Cucu...   251   4e-65
gb|AFW55790.1| putative clathrin heavy chain family protein [Zea...   250   7e-65
gb|AGC82051.1| clathrin heavy chain 1 [Zea mays]                      249   2e-64

>ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1700

 Score =  252 bits (644), Expect = 2e-65
 Identities = 128/170 (75%), Positives = 139/170 (81%), Gaps = 28/170 (16%)
 Frame = -2

Query: 427  GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284
            GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ            
Sbjct: 522  GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLL 581

Query: 283  ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152
                            VLEINLVTFPNVADA+LAN MFSHY+RP IAQLCEKAGL++RSL
Sbjct: 582  DVLKPNLPEHGYLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRSL 641

Query: 151  QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2
            QHY++LPDIKRVI+NTHAIEPQSLVEFFG+LSREW LECMKDLLLVNLRG
Sbjct: 642  QHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLVNLRG 691


>ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus communis]
            gi|223532266|gb|EEF34069.1| clathrin heavy chain,
            putative [Ricinus communis]
          Length = 1705

 Score =  252 bits (644), Expect = 2e-65
 Identities = 128/170 (75%), Positives = 139/170 (81%), Gaps = 28/170 (16%)
 Frame = -2

Query: 427  GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284
            GYTP+YLFLLQTILRSDPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ            
Sbjct: 522  GYTPDYLFLLQTILRSDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLL 581

Query: 283  ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152
                            VLEINLVTFPNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L
Sbjct: 582  DVLKPNLPEHSFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRAL 641

Query: 151  QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2
            QHYS+LPDIKRVI+NTHAIEPQ+LVEFFG+LSREW LECMKDLLLVNLRG
Sbjct: 642  QHYSELPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRG 691


>ref|XP_004138417.1| PREDICTED: clathrin heavy chain 1-like [Cucumis sativus]
            gi|449499116|ref|XP_004160726.1| PREDICTED: clathrin
            heavy chain 1-like [Cucumis sativus]
          Length = 1707

 Score =  251 bits (641), Expect = 4e-65
 Identities = 127/170 (74%), Positives = 139/170 (81%), Gaps = 28/170 (16%)
 Frame = -2

Query: 427  GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284
            GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ            
Sbjct: 522  GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLL 581

Query: 283  ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152
                            VLEINLVTFPNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L
Sbjct: 582  DVLKPNLPEHAFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRAL 641

Query: 151  QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2
            QHY++LPDIKRVI+NTHAIEPQSLVEFFG+LSREW LECMKDLLLVNLRG
Sbjct: 642  QHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLVNLRG 691


>gb|AFW55790.1| putative clathrin heavy chain family protein [Zea mays]
          Length = 1707

 Score =  250 bits (639), Expect = 7e-65
 Identities = 126/170 (74%), Positives = 139/170 (81%), Gaps = 28/170 (16%)
 Frame = -2

Query: 427  GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284
            GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ            
Sbjct: 522  GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLL 581

Query: 283  ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152
                            VLEINLVT+PNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L
Sbjct: 582  DVLKPNLPDHAFLQTKVLEINLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRAL 641

Query: 151  QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2
            QHYS+LPDIKRVI+NTHAIEPQ+LVEFFG+LSREW LECMKDLLLVNLRG
Sbjct: 642  QHYSELPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRG 691


>gb|AGC82051.1| clathrin heavy chain 1 [Zea mays]
          Length = 1693

 Score =  249 bits (635), Expect = 2e-64
 Identities = 125/170 (73%), Positives = 138/170 (81%), Gaps = 28/170 (16%)
 Frame = -2

Query: 427  GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284
            GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ            
Sbjct: 513  GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLL 572

Query: 283  ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152
                            VLEINLVT+PNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L
Sbjct: 573  DVLKPNLPEHAFLQTKVLEINLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRAL 632

Query: 151  QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2
            QHYS+LPDIKR I+NTHAIEPQ+LVEFFG+LSREW LECMKDLLLVNLRG
Sbjct: 633  QHYSELPDIKRAIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRG 682


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