BLASTX nr result
ID: Coptis25_contig00039924
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00039924 (428 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glyc... 252 2e-65 ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus comm... 252 2e-65 ref|XP_004138417.1| PREDICTED: clathrin heavy chain 1-like [Cucu... 251 4e-65 gb|AFW55790.1| putative clathrin heavy chain family protein [Zea... 250 7e-65 gb|AGC82051.1| clathrin heavy chain 1 [Zea mays] 249 2e-64 >ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glycine max] Length = 1700 Score = 252 bits (644), Expect = 2e-65 Identities = 128/170 (75%), Positives = 139/170 (81%), Gaps = 28/170 (16%) Frame = -2 Query: 427 GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284 GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ Sbjct: 522 GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLL 581 Query: 283 ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152 VLEINLVTFPNVADA+LAN MFSHY+RP IAQLCEKAGL++RSL Sbjct: 582 DVLKPNLPEHGYLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRSL 641 Query: 151 QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2 QHY++LPDIKRVI+NTHAIEPQSLVEFFG+LSREW LECMKDLLLVNLRG Sbjct: 642 QHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLVNLRG 691 >ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus communis] gi|223532266|gb|EEF34069.1| clathrin heavy chain, putative [Ricinus communis] Length = 1705 Score = 252 bits (644), Expect = 2e-65 Identities = 128/170 (75%), Positives = 139/170 (81%), Gaps = 28/170 (16%) Frame = -2 Query: 427 GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284 GYTP+YLFLLQTILRSDPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ Sbjct: 522 GYTPDYLFLLQTILRSDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLL 581 Query: 283 ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152 VLEINLVTFPNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L Sbjct: 582 DVLKPNLPEHSFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRAL 641 Query: 151 QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2 QHYS+LPDIKRVI+NTHAIEPQ+LVEFFG+LSREW LECMKDLLLVNLRG Sbjct: 642 QHYSELPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRG 691 >ref|XP_004138417.1| PREDICTED: clathrin heavy chain 1-like [Cucumis sativus] gi|449499116|ref|XP_004160726.1| PREDICTED: clathrin heavy chain 1-like [Cucumis sativus] Length = 1707 Score = 251 bits (641), Expect = 4e-65 Identities = 127/170 (74%), Positives = 139/170 (81%), Gaps = 28/170 (16%) Frame = -2 Query: 427 GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284 GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ Sbjct: 522 GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLL 581 Query: 283 ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152 VLEINLVTFPNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L Sbjct: 582 DVLKPNLPEHAFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRAL 641 Query: 151 QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2 QHY++LPDIKRVI+NTHAIEPQSLVEFFG+LSREW LECMKDLLLVNLRG Sbjct: 642 QHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLVNLRG 691 >gb|AFW55790.1| putative clathrin heavy chain family protein [Zea mays] Length = 1707 Score = 250 bits (639), Expect = 7e-65 Identities = 126/170 (74%), Positives = 139/170 (81%), Gaps = 28/170 (16%) Frame = -2 Query: 427 GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284 GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ Sbjct: 522 GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLL 581 Query: 283 ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152 VLEINLVT+PNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L Sbjct: 582 DVLKPNLPDHAFLQTKVLEINLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRAL 641 Query: 151 QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2 QHYS+LPDIKRVI+NTHAIEPQ+LVEFFG+LSREW LECMKDLLLVNLRG Sbjct: 642 QHYSELPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRG 691 >gb|AGC82051.1| clathrin heavy chain 1 [Zea mays] Length = 1693 Score = 249 bits (635), Expect = 2e-64 Identities = 125/170 (73%), Positives = 138/170 (81%), Gaps = 28/170 (16%) Frame = -2 Query: 427 GYTPEYLFLLQTILRSDPQGAVNFALMISQMEGGCPVDYNTITDLFLQ------------ 284 GYTP+YLFLLQTILR+DPQGAVNFALM+SQMEGGCPVDYNTITDLFLQ Sbjct: 513 GYTPDYLFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLL 572 Query: 283 ----------------VLEINLVTFPNVADAVLANRMFSHYNRPHIAQLCEKAGLFMRSL 152 VLEINLVT+PNVADA+LAN MFSHY+RP IAQLCEKAGL++R+L Sbjct: 573 DVLKPNLPEHAFLQTKVLEINLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRAL 632 Query: 151 QHYSDLPDIKRVIMNTHAIEPQSLVEFFGSLSREWELECMKDLLLVNLRG 2 QHYS+LPDIKR I+NTHAIEPQ+LVEFFG+LSREW LECMKDLLLVNLRG Sbjct: 633 QHYSELPDIKRAIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRG 682