BLASTX nr result

ID: Coptis25_contig00039913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039913
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   124   8e-27
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   118   6e-25
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   117   1e-24
ref|XP_002439959.1| hypothetical protein SORBIDRAFT_09g023410 [S...   115   5e-24
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/92 (68%), Positives = 72/92 (78%)
 Frame = +3

Query: 3    DIGEASLTFRQLNDITNTYRIGRALHTDVAEGDLVTFEQMKLNLVELHQKWQTIFTWHDG 182
            DIG AS T  QL+ I N+Y+ G     DV   DL TF +MKL+L +LHQKWQTIF W DG
Sbjct: 1437 DIGHASQTLDQLDVIVNSYQQGITPWADVTRQDLDTFVRMKLDLAQLHQKWQTIFMWQDG 1496

Query: 183  PLVQSMKNGDLFLVDEISLADDSILERLNSVL 278
            PLVQ+MK+GDLFLVDEISLADDS+LERLNSVL
Sbjct: 1497 PLVQAMKDGDLFLVDEISLADDSVLERLNSVL 1528


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = +3

Query: 3    DIGEASLTFRQLNDITNTYRIGRALHTDVAEGDLVTFEQMKLNLVELHQKWQTIFTWHDG 182
            DIG+ASLT   L  I ++YR  + L  DV   DL   E++KL+L +L+QKWQTIFTW DG
Sbjct: 1423 DIGQASLTLDHLAAIISSYRQCKVLCPDVTAQDLDALEEIKLDLSQLYQKWQTIFTWQDG 1482

Query: 183  PLVQSMKNGDLFLVDEISLADDSILERLNSVL 278
            PLVQ+M+ GDLFLVDEISLADDS+LERLNSVL
Sbjct: 1483 PLVQAMRAGDLFLVDEISLADDSVLERLNSVL 1514


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/91 (62%), Positives = 70/91 (76%)
 Frame = +3

Query: 6    IGEASLTFRQLNDITNTYRIGRALHTDVAEGDLVTFEQMKLNLVELHQKWQTIFTWHDGP 185
            + +ASLT   LN +   Y+ GR    DV + +L  FEQ+KLNL  LH+KWQ+IF W DGP
Sbjct: 972  VDQASLTIDLLNSMIRKYKEGRVCTADVIKEELYAFEQLKLNLDVLHRKWQSIFEWQDGP 1031

Query: 186  LVQSMKNGDLFLVDEISLADDSILERLNSVL 278
            LV++MK+GDLFLVDEISLADDS+LERLNSVL
Sbjct: 1032 LVKAMKDGDLFLVDEISLADDSVLERLNSVL 1062


>ref|XP_002439959.1| hypothetical protein SORBIDRAFT_09g023410 [Sorghum bicolor]
            gi|241945244|gb|EES18389.1| hypothetical protein
            SORBIDRAFT_09g023410 [Sorghum bicolor]
          Length = 1126

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/92 (59%), Positives = 68/92 (73%)
 Frame = +3

Query: 3    DIGEASLTFRQLNDITNTYRIGRALHTDVAEGDLVTFEQMKLNLVELHQKWQTIFTWHDG 182
            D+  A      LN+I + YR  + L  DV+  DL   EQ+KL+L+ LH++WQ IF W DG
Sbjct: 1027 DVSGADSVISHLNEILDRYRKEKYLFPDVSAQDLAAMEQIKLDLMHLHRRWQAIFLWQDG 1086

Query: 183  PLVQSMKNGDLFLVDEISLADDSILERLNSVL 278
            PLVQ+MKNGDLFL+DEISLADDS+LERLNSVL
Sbjct: 1087 PLVQAMKNGDLFLIDEISLADDSVLERLNSVL 1118


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/92 (65%), Positives = 69/92 (75%)
 Frame = +3

Query: 3    DIGEASLTFRQLNDITNTYRIGRALHTDVAEGDLVTFEQMKLNLVELHQKWQTIFTWHDG 182
            DIG+AS T   LN I  +YR G+    +V+  D+ T EQMK +L  L QKWQTIF W DG
Sbjct: 1416 DIGQASSTLDHLNLIITSYRQGQVSCPNVSAKDIDTLEQMKWDLTCLLQKWQTIFMWQDG 1475

Query: 183  PLVQSMKNGDLFLVDEISLADDSILERLNSVL 278
            PLVQ+MK GDLFLVDEISLADDS+LERLNSVL
Sbjct: 1476 PLVQAMKAGDLFLVDEISLADDSVLERLNSVL 1507


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