BLASTX nr result

ID: Coptis25_contig00039911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039911
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160202.1| PREDICTED: ABC transporter G family member 3...    94   1e-17
ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    94   1e-17
emb|CBI15958.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...    92   3e-17
ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_004160202.1| PREDICTED: ABC transporter G family member 31-like [Cucumis
           sativus]
          Length = 743

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = +1

Query: 181 KESGNITYNGHSLGEFCVQRTSAYISQTDNHIAELTVRETLDFAARFQGASD 336
           K++GNITYNGH L EFCVQRTSAYISQ+DNH+AELTVRETLDFAAR QGAS+
Sbjct: 214 KKTGNITYNGHHLKEFCVQRTSAYISQSDNHLAELTVRETLDFAARCQGASE 265


>ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           31-like [Cucumis sativus]
          Length = 1486

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = +1

Query: 181 KESGNITYNGHSLGEFCVQRTSAYISQTDNHIAELTVRETLDFAARFQGASD 336
           K++GNITYNGH L EFCVQRTSAYISQ+DNH+AELTVRETLDFAAR QGAS+
Sbjct: 214 KKTGNITYNGHHLKEFCVQRTSAYISQSDNHLAELTVRETLDFAARCQGASE 265


>emb|CBI15958.3| unnamed protein product [Vitis vinifera]
          Length = 1483

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = +1

Query: 166 LA*RAKESGNITYNGHSLGEFCVQRTSAYISQTDNHIAELTVRETLDFAARFQGASD 336
           LA   K+SG ITYNGH+  EFC+QRTSAY SQTDNHIAELTVRETLDFAAR QGA++
Sbjct: 189 LAGNLKKSGRITYNGHTFNEFCIQRTSAYTSQTDNHIAELTVRETLDFAARCQGANE 245


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = +1

Query: 166 LA*RAKESGNITYNGHSLGEFCVQRTSAYISQTDNHIAELTVRETLDFAARFQGASD 336
           LA   K+SG ITYNGH+  EFC+QRTSAY SQTDNHIAELTVRETLDFAAR QGA++
Sbjct: 202 LAGNLKKSGRITYNGHTFNEFCIQRTSAYTSQTDNHIAELTVRETLDFAARCQGANE 258


>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/57 (77%), Positives = 48/57 (84%)
 Frame = +1

Query: 166 LA*RAKESGNITYNGHSLGEFCVQRTSAYISQTDNHIAELTVRETLDFAARFQGASD 336
           LA   K+SGNITYNG    +F VQRTSAYISQTDNHIAELTVRETLDFAA +QGAS+
Sbjct: 208 LAKNLKKSGNITYNGQKFDDFYVQRTSAYISQTDNHIAELTVRETLDFAACWQGASE 264


Top