BLASTX nr result

ID: Coptis25_contig00039883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039883
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01294.1| unnamed protein product [Arabidopsis thaliana]        121   8e-26
ref|NP_001118666.1| uncharacterized protein [Arabidopsis thalian...   121   8e-26
ref|NP_566648.1| uncharacterized protein [Arabidopsis thaliana] ...   121   8e-26
ref|XP_002269529.2| PREDICTED: uncharacterized protein LOC100253...   120   1e-25
ref|XP_002883204.1| hypothetical protein ARALYDRAFT_479497 [Arab...   118   5e-25

>dbj|BAB01294.1| unnamed protein product [Arabidopsis thaliana]
          Length = 196

 Score =  121 bits (303), Expect = 8e-26
 Identities = 56/95 (58%), Positives = 75/95 (78%)
 Frame = -3

Query: 555 INTAFDVWVLPSSKDDRSVHLPDMGDDDPSVIYVKPGCEANLDSLIQDTIRLTTSVKETC 376
           I+T+F VW+LPSS+++R+  LP++G DDPSVIYV+PG EANLDSL+QDTIRLTT  K+ C
Sbjct: 102 IDTSFTVWILPSSRENRASTLPEIGGDDPSVIYVRPGYEANLDSLVQDTIRLTTYAKDIC 161

Query: 375 SESCEKAEQRWQFGTNETSSSIDGRWSTLLKLKGK 271
           S+SCEK+E    +     ++S+D RWS LL+LK K
Sbjct: 162 SDSCEKSEPTLHYVGQTNTASVDKRWSRLLELKKK 196


>ref|NP_001118666.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332642770|gb|AEE76291.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 226

 Score =  121 bits (303), Expect = 8e-26
 Identities = 56/95 (58%), Positives = 75/95 (78%)
 Frame = -3

Query: 555 INTAFDVWVLPSSKDDRSVHLPDMGDDDPSVIYVKPGCEANLDSLIQDTIRLTTSVKETC 376
           I+T+F VW+LPSS+++R+  LP++G DDPSVIYV+PG EANLDSL+QDTIRLTT  K+ C
Sbjct: 132 IDTSFTVWILPSSRENRASTLPEIGGDDPSVIYVRPGYEANLDSLVQDTIRLTTYAKDIC 191

Query: 375 SESCEKAEQRWQFGTNETSSSIDGRWSTLLKLKGK 271
           S+SCEK+E    +     ++S+D RWS LL+LK K
Sbjct: 192 SDSCEKSEPTLHYVGQTNTASVDKRWSRLLELKKK 226


>ref|NP_566648.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13430476|gb|AAK25860.1|AF360150_1 unknown protein
           [Arabidopsis thaliana] gi|15810535|gb|AAL07155.1|
           unknown protein [Arabidopsis thaliana]
           gi|21593667|gb|AAM65634.1| unknown [Arabidopsis
           thaliana] gi|332642769|gb|AEE76290.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 229

 Score =  121 bits (303), Expect = 8e-26
 Identities = 56/95 (58%), Positives = 75/95 (78%)
 Frame = -3

Query: 555 INTAFDVWVLPSSKDDRSVHLPDMGDDDPSVIYVKPGCEANLDSLIQDTIRLTTSVKETC 376
           I+T+F VW+LPSS+++R+  LP++G DDPSVIYV+PG EANLDSL+QDTIRLTT  K+ C
Sbjct: 135 IDTSFTVWILPSSRENRASTLPEIGGDDPSVIYVRPGYEANLDSLVQDTIRLTTYAKDIC 194

Query: 375 SESCEKAEQRWQFGTNETSSSIDGRWSTLLKLKGK 271
           S+SCEK+E    +     ++S+D RWS LL+LK K
Sbjct: 195 SDSCEKSEPTLHYVGQTNTASVDKRWSRLLELKKK 229


>ref|XP_002269529.2| PREDICTED: uncharacterized protein LOC100253004 [Vitis vinifera]
          Length = 235

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/97 (60%), Positives = 77/97 (79%)
 Frame = -3

Query: 555 INTAFDVWVLPSSKDDRSVHLPDMGDDDPSVIYVKPGCEANLDSLIQDTIRLTTSVKETC 376
           ++T F VWVLP+S+++    L ++G DDPSVIYVKPGCEANLDSLIQDTIRLTTSVK+TC
Sbjct: 141 VDTNFTVWVLPTSRENCG--LAEIGGDDPSVIYVKPGCEANLDSLIQDTIRLTTSVKDTC 198

Query: 375 SESCEKAEQRWQFGTNETSSSIDGRWSTLLKLKGKTI 265
           SE+CEK+E   Q+   + ++SID RWS LL+L+   +
Sbjct: 199 SETCEKSEPTLQYIGAKNAASIDMRWSRLLELRNANL 235


>ref|XP_002883204.1| hypothetical protein ARALYDRAFT_479497 [Arabidopsis lyrata subsp.
           lyrata] gi|297329044|gb|EFH59463.1| hypothetical protein
           ARALYDRAFT_479497 [Arabidopsis lyrata subsp. lyrata]
          Length = 226

 Score =  118 bits (296), Expect = 5e-25
 Identities = 55/95 (57%), Positives = 74/95 (77%)
 Frame = -3

Query: 555 INTAFDVWVLPSSKDDRSVHLPDMGDDDPSVIYVKPGCEANLDSLIQDTIRLTTSVKETC 376
           I+T+F VW+LPSS+++R+  LP++G DDPSVIYV+PG EANLDSL+QDTIRLTT  K+ C
Sbjct: 132 IDTSFTVWILPSSRENRASTLPEIGGDDPSVIYVRPGYEANLDSLVQDTIRLTTYAKDIC 191

Query: 375 SESCEKAEQRWQFGTNETSSSIDGRWSTLLKLKGK 271
           S+SCEK+E    +     ++S+  RWS LL+LK K
Sbjct: 192 SDSCEKSEPTLHYVGETNTASVHKRWSRLLELKKK 226


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