BLASTX nr result

ID: Coptis25_contig00039877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039877
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|2...   248   4e-64
ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7...   245   4e-63
ref|XP_002305078.1| predicted protein [Populus trichocarpa] gi|2...   242   3e-62
ref|XP_003546026.1| PREDICTED: U-box domain-containing protein 7...   232   3e-59
ref|XP_004170932.1| PREDICTED: U-box domain-containing protein 7...   227   1e-57

>ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|222859894|gb|EEE97441.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  248 bits (634), Expect = 4e-64
 Identities = 135/198 (68%), Positives = 155/198 (78%), Gaps = 1/198 (0%)
 Frame = -2

Query: 593 LYNLSSMLGNVGFLVSDGVVHTLLTLSSDQEVSEKALAILGNLVVSIMGKKAMENDPMVP 414
           LYNLS++L N G L+S+GVV TLL L S + +SEKALA LG+LVV++MGKKAMEN  +VP
Sbjct: 218 LYNLSAVLDNTGALLSNGVVQTLLRLISVKALSEKALATLGHLVVTLMGKKAMENSSLVP 277

Query: 413 DSLIEIMTWETKPKCQELAAYILMILAHQSSVQRAKMAKSGIVQVLLEVALLGSPLAQKR 234
           +SLIEIMTWE KPKCQEL+AYILMILAHQSS QR KMAKSGIV  LLE+ALLGSPLAQKR
Sbjct: 278 ESLIEIMTWEDKPKCQELSAYILMILAHQSSAQREKMAKSGIVPALLELALLGSPLAQKR 337

Query: 233 ALKLLQWFKDEKQTRIGAHSGPQTGSTVIASHSNENEXXXXXXXXXXXXKQSLLKNLEVI 54
           ALKLLQWFKDE+QTR+G HSGPQT    I S  N +E            KQSL KN+E+I
Sbjct: 338 ALKLLQWFKDERQTRMGPHSGPQTARIAIGSPVNHSEAQEGKKLMKDLVKQSLHKNMELI 397

Query: 53  MRRAN-TGGESSMVKAFV 3
            RRAN T G SSM+K+ V
Sbjct: 398 TRRANATSGHSSMLKSLV 415


>ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7 [Vitis vinifera]
           gi|297740492|emb|CBI30674.3| unnamed protein product
           [Vitis vinifera]
          Length = 431

 Score =  245 bits (626), Expect = 4e-63
 Identities = 132/197 (67%), Positives = 153/197 (77%)
 Frame = -2

Query: 593 LYNLSSMLGNVGFLVSDGVVHTLLTLSSDQEVSEKALAILGNLVVSIMGKKAMENDPMVP 414
           LYNLS++L N G LV+ GVV +LL L S +EVSEKALA LGNLVV++MGKKA+EN  +VP
Sbjct: 225 LYNLSAVLDNSGPLVNGGVVQSLLRLVSVKEVSEKALATLGNLVVTMMGKKAVENSTLVP 284

Query: 413 DSLIEIMTWETKPKCQELAAYILMILAHQSSVQRAKMAKSGIVQVLLEVALLGSPLAQKR 234
           +SLIEIMTWE KPKCQEL+AYILMILAHQSSVQR KMAK+GIV V+LEVALLGSPLAQKR
Sbjct: 285 ESLIEIMTWEDKPKCQELSAYILMILAHQSSVQRQKMAKAGIVPVMLEVALLGSPLAQKR 344

Query: 233 ALKLLQWFKDEKQTRIGAHSGPQTGSTVIASHSNENEXXXXXXXXXXXXKQSLLKNLEVI 54
            LKLLQWFKDE+QTR+G HSGPQ G  V+ S  N+ E            KQSL KN+E+I
Sbjct: 345 VLKLLQWFKDERQTRMGPHSGPQAGRYVMGSPMNQRETLEGKKLMKTMVKQSLNKNMEMI 404

Query: 53  MRRANTGGESSMVKAFV 3
            RRAN    +S +K  V
Sbjct: 405 TRRANAATAASTLKTLV 421


>ref|XP_002305078.1| predicted protein [Populus trichocarpa] gi|222848042|gb|EEE85589.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  242 bits (618), Expect = 3e-62
 Identities = 132/198 (66%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
 Frame = -2

Query: 593 LYNLSSMLGNVGFLVSDGVVHTLLTLSSDQEVSEKALAILGNLVVSIMGKKAMENDPMVP 414
           LYNLS++L N G L+S+G V TLL + S++E SEKALA LG+LVV++MGKKAMEN  +VP
Sbjct: 230 LYNLSAVLDNAGPLLSNGAVQTLLRVISEKEFSEKALATLGHLVVTLMGKKAMENSSLVP 289

Query: 413 DSLIEIMTWETKPKCQELAAYILMILAHQSSVQRAKMAKSGIVQVLLEVALLGSPLAQKR 234
           +SLIEIMTWE KPKCQEL+AYILMILAHQSS  R KM KSGIV VLLEVALLGSPLAQKR
Sbjct: 290 ESLIEIMTWEDKPKCQELSAYILMILAHQSSALRDKMLKSGIVPVLLEVALLGSPLAQKR 349

Query: 233 ALKLLQWFKDEKQTRIGAHSGPQTGSTVIASHSNENEXXXXXXXXXXXXKQSLLKNLEVI 54
           ALKLLQWFKDE+QTR+G HSGPQT    I S  N  E            KQSL KN+E+I
Sbjct: 350 ALKLLQWFKDERQTRMGPHSGPQTARIAIGSPVNNREPQEGKKLMKDLVKQSLQKNMELI 409

Query: 53  MRRAN-TGGESSMVKAFV 3
            +RAN T G+SS  K+ V
Sbjct: 410 TQRANATSGDSSKFKSLV 427


>ref|XP_003546026.1| PREDICTED: U-box domain-containing protein 7-like [Glycine max]
          Length = 436

 Score =  232 bits (592), Expect = 3e-59
 Identities = 121/197 (61%), Positives = 152/197 (77%)
 Frame = -2

Query: 593 LYNLSSMLGNVGFLVSDGVVHTLLTLSSDQEVSEKALAILGNLVVSIMGKKAMENDPMVP 414
           L+NLS++L N   LVS GVV  LL +SS +E+SEKALA LGNL V++MGKKA+EN+ MVP
Sbjct: 230 LHNLSTVLENACPLVSSGVVPILLDVSSIKEISEKALATLGNLSVTLMGKKAIENNSMVP 289

Query: 413 DSLIEIMTWETKPKCQELAAYILMILAHQSSVQRAKMAKSGIVQVLLEVALLGSPLAQKR 234
           ++ IEI++WE KPKCQEL+ YILMILAHQSS+QR KMA++GIV VLLEV LLGSPLAQKR
Sbjct: 290 ETFIEILSWEDKPKCQELSVYILMILAHQSSLQRKKMAQAGIVPVLLEVVLLGSPLAQKR 349

Query: 233 ALKLLQWFKDEKQTRIGAHSGPQTGSTVIASHSNENEXXXXXXXXXXXXKQSLLKNLEVI 54
           A+KLLQWFKDE+QT++G HSGPQT    + S  N+ E            KQSL +N+E+I
Sbjct: 350 AMKLLQWFKDERQTKVGPHSGPQTPRFAMGSPVNQREAKEGKRLMKSLVKQSLHRNMEII 409

Query: 53  MRRANTGGESSMVKAFV 3
            +RAN  GESS +K+ +
Sbjct: 410 AQRANAAGESSRLKSLI 426


>ref|XP_004170932.1| PREDICTED: U-box domain-containing protein 7-like, partial [Cucumis
           sativus]
          Length = 445

 Score =  227 bits (578), Expect = 1e-57
 Identities = 122/192 (63%), Positives = 146/192 (76%)
 Frame = -2

Query: 593 LYNLSSMLGNVGFLVSDGVVHTLLTLSSDQEVSEKALAILGNLVVSIMGKKAMENDPMVP 414
           LYN+S++L NVG LVS+GVVH LL +SS + +S++ALA LGNLVV+  GK+ ME+  MVP
Sbjct: 240 LYNISTVLENVGPLVSNGVVHILLKMSSSKGLSDRALAALGNLVVTSQGKREMESSQMVP 299

Query: 413 DSLIEIMTWETKPKCQELAAYILMILAHQSSVQRAKMAKSGIVQVLLEVALLGSPLAQKR 234
           DSLI+IMTWE KPK  EL+AYILM+LAHQSS QR KMAKSGIV VLLEVALLGSPLAQKR
Sbjct: 300 DSLIKIMTWEDKPKSTELSAYILMMLAHQSSEQREKMAKSGIVAVLLEVALLGSPLAQKR 359

Query: 233 ALKLLQWFKDEKQTRIGAHSGPQTGSTVIASHSNENEXXXXXXXXXXXXKQSLLKNLEVI 54
           ALKLLQWFK+EKQ ++  HSGPQTG  VI S  N+ E            KQSL KN+E+I
Sbjct: 360 ALKLLQWFKNEKQAKMDPHSGPQTGRIVIGSPVNQREVQEGRKMMKNLVKQSLYKNMELI 419

Query: 53  MRRANTGGESSM 18
             RA+ G  + +
Sbjct: 420 TGRASAGDPAKL 431


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