BLASTX nr result

ID: Coptis25_contig00039867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039867
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17206.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...    78   7e-13
ref|XP_003545233.1| PREDICTED: probable LRR receptor-like serine...    75   7e-12
ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine...    72   4e-11

>emb|CBI17206.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 6/87 (6%)
 Frame = +2

Query: 5   DGLSLHLFCKMALPHKVLEIIDMRLLSEETQSKVPNVTNH------LTECLSSVMRIGVK 166
           DGLSLH F KMALP +V+EI D  L+ E  ++ + N+ NH      + +CL+S+ RIGV 
Sbjct: 730 DGLSLHSFSKMALPERVMEIADSTLVGESGEA-INNIANHGDMEGRMQDCLASIARIGVA 788

Query: 167 CSEELLTERMDIQDVLNEMHSIKKVFL 247
           CSEE    RMDI+DV+ E++ IK+VFL
Sbjct: 789 CSEESPGGRMDIKDVVMELNIIKEVFL 815


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 6/87 (6%)
 Frame = +2

Query: 5    DGLSLHLFCKMALPHKVLEIIDMRLLSEETQSKVPNVTNHLT------ECLSSVMRIGVK 166
            DGL+LH F KMAL  +V+EI D  L+ E +++ + N+ NH         CL+S+ RIGV 
Sbjct: 1246 DGLNLHSFSKMALLERVMEIADSNLVGESSEA-INNIENHCDMEGRTQHCLASIARIGVA 1304

Query: 167  CSEELLTERMDIQDVLNEMHSIKKVFL 247
            CSEE   +R+DI+DV+ E++ IKKVFL
Sbjct: 1305 CSEESPGDRLDIKDVVMELNIIKKVFL 1331


>ref|XP_003545233.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Glycine max]
          Length = 948

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/78 (44%), Positives = 51/78 (65%)
 Frame = +2

Query: 5    DGLSLHLFCKMALPHKVLEIIDMRLLSEETQSKVPNVTNHLTECLSSVMRIGVKCSEELL 184
            +GLSLH FC+M +P ++ EI+D RLL    +     +  ++ ECL +  RIGV CS EL 
Sbjct: 867  EGLSLHKFCQMTIPEEITEIVDSRLLVPINKEGTRVIETNIRECLVAFARIGVSCSAELP 926

Query: 185  TERMDIQDVLNEMHSIKK 238
              RMDI+DV+ E+ +IK+
Sbjct: 927  VRRMDIKDVIMELEAIKQ 944


>ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|222874576|gb|EEF11707.1|
            predicted protein [Populus trichocarpa]
          Length = 1008

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/82 (47%), Positives = 55/82 (67%)
 Frame = +2

Query: 2    KDGLSLHLFCKMALPHKVLEIIDMRLLSEETQSKVPNVTNHLTECLSSVMRIGVKCSEEL 181
            KDGL LH + K+ALP +V++I D +LL+E  Q K    T+ + ECL S+ +IGV CSE+ 
Sbjct: 923  KDGLELHSYVKIALPDRVVDIADPKLLTEVDQGKG---TDQIVECLISISKIGVFCSEKF 979

Query: 182  LTERMDIQDVLNEMHSIKKVFL 247
              ERMDI +V+ E++  K  FL
Sbjct: 980  PKERMDISNVVAELNRTKANFL 1001


>ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Glycine max]
          Length = 952

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = +2

Query: 5    DGLSLHLFCKMALPHKVLEIIDMRLL---SEETQSKVPNVTNHLTECLSSVMRIGVKCSE 175
            + LSLH FC+MA+P  + EI+D RLL   + E  ++V  +  ++ ECL S  RIG+ CS 
Sbjct: 868  ESLSLHKFCQMAIPEGITEIVDSRLLVPTTTEEGTRVRVMERNIRECLVSFARIGLTCSA 927

Query: 176  ELLTERMDIQDVLNEMHSIKK 238
            EL  +R+ I+DV+ E+H IKK
Sbjct: 928  ELPVQRISIKDVIVELHLIKK 948


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