BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039861
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]   161   4e-38
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat...   159   2e-37
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi...   159   2e-37
ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35

>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/108 (67%), Positives = 89/108 (82%)
 Frame = -3

Query: 328 DRVIELFEEMLAEGTDPDYITYVSVLSACSHSKRVKEGFHYFNSMSNVHKMKPGPEHYSC 149
           ++VIELFE ML+EG +P ++T+V VLSACSH+ RV+EG  +FNSM  +H M PGPEHY+C
Sbjct: 296 NQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYAC 355

Query: 148 MVDMLSRAGLLYEAKEFIESMPIKPDPSVWGALLGACRNYNNLEMAKE 5
           MVD+L RAG L EAK FIESMP+KP PSVWGALLGACR Y NL+M +E
Sbjct: 356 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGRE 403


>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/108 (67%), Positives = 89/108 (82%)
 Frame = -3

Query: 328 DRVIELFEEMLAEGTDPDYITYVSVLSACSHSKRVKEGFHYFNSMSNVHKMKPGPEHYSC 149
           ++VIELFE ML+EG +P ++T+V VLSACSH+ RV+EG  +FNSM  +H M PGPEHY+C
Sbjct: 531 NQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYAC 590

Query: 148 MVDMLSRAGLLYEAKEFIESMPIKPDPSVWGALLGACRNYNNLEMAKE 5
           MVD+L RAG L EAK FIESMP+KP PSVWGALLGACR Y NL+M +E
Sbjct: 591 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGRE 638


>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/107 (71%), Positives = 88/107 (82%)
 Frame = -3

Query: 322 VIELFEEMLAEGTDPDYITYVSVLSACSHSKRVKEGFHYFNSMSNVHKMKPGPEHYSCMV 143
           V+ELFE+ML EG  PDYIT+VSVLSACSH+ RV+EGF YFNSM  VH + PG EHY+C+V
Sbjct: 270 VVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIV 329

Query: 142 DMLSRAGLLYEAKEFIESMPIKPDPSVWGALLGACRNYNNLEMAKEV 2
           D+LSRAG L  AK FIE MPIKPD SVWGALL ACRN++NL M KEV
Sbjct: 330 DLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEV 376


>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/107 (71%), Positives = 88/107 (82%)
 Frame = -3

Query: 322 VIELFEEMLAEGTDPDYITYVSVLSACSHSKRVKEGFHYFNSMSNVHKMKPGPEHYSCMV 143
           V+ELFE+ML EG  PDYIT+VSVLSACSH+ RV+EGF YFNSM  VH + PG EHY+C+V
Sbjct: 418 VVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIV 477

Query: 142 DMLSRAGLLYEAKEFIESMPIKPDPSVWGALLGACRNYNNLEMAKEV 2
           D+LSRAG L  AK FIE MPIKPD SVWGALL ACRN++NL M KEV
Sbjct: 478 DLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEV 524


>ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/109 (64%), Positives = 86/109 (78%)
 Frame = -3

Query: 328 DRVIELFEEMLAEGTDPDYITYVSVLSACSHSKRVKEGFHYFNSMSNVHKMKPGPEHYSC 149
           +  I+LFEEML EG  P+YIT+VSVLSACSH+ ++ +GF YFNSM+NVH +KPG EHY+C
Sbjct: 483 NEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYAC 542

Query: 148 MVDMLSRAGLLYEAKEFIESMPIKPDPSVWGALLGACRNYNNLEMAKEV 2
           MVD+L R G L EA  FIESMP +PD  VWGALLGAC  + N+EM +EV
Sbjct: 543 MVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREV 591