BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039857
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
gb|ABK95971.1| unknown [Populus trichocarpa]                           82   6e-14
sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-c...    79   5e-13
ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...    70   1e-10
ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10

>ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|222837783|gb|EEE76148.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
 Frame = +2

Query: 8   ILSASKLHNLKQKMKESSFQGHWQNVLTHYLGLKKSE----DPTLFPHVFKSCANLHCLK 175
           I+S SKL N   ++KESS  G WQ V++HY  +KK+     D ++FP + K+ + L   +
Sbjct: 6   IVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-R 64

Query: 176 EGTSFHACVIKQGLKPYTSIGNSIINFYMKCG 271
            G S HAC+IKQG   +TSIGNSI+ FY++CG
Sbjct: 65  HGKSLHACLIKQGFDSFTSIGNSIMGFYIRCG 96


>gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
 Frame = +2

Query: 8   ILSASKLHNLKQKMKESSFQGHWQNVLTHYLGLKKSE----DPTLFPHVFKSCANLHCLK 175
           I+S SKL N   ++KESS  G WQ V++HY  +KK+     D ++FP + K+ + L   +
Sbjct: 6   IVSGSKLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-R 64

Query: 176 EGTSFHACVIKQGLKPYTSIGNSIINFYMKCG 271
            G S HAC+IKQG   +TSIGNSI+ FY++CG
Sbjct: 65  HGKSLHACLIKQGFDSFTSIGNSIMGFYIRCG 96


>sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
          Length = 736

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
 Frame = +2

Query: 20  SKLHNLKQKMKESSFQGHWQNVLTHYLGLKKS----EDPTLFPHVFKSCANLHCLKEGTS 187
           SKL  L  K+K++S  G W+ V++ Y  ++++     DP +FP VFK+CA L  L +G  
Sbjct: 9   SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRC 68

Query: 188 FHACVIKQGLKPYTSIGNSIINFYMKCG 271
             A ++K+G + + S+GNSI +FYMKCG
Sbjct: 69  IQASLLKRGFESFVSVGNSIADFYMKCG 96


>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
 Frame = +2

Query: 11  LSASKLHNLKQKMKESSFQGHWQNVLTHYLGLKKSE------DPTLFPHVFKSCANLHCL 172
           LS S+L +   ++KE S    W  V++ Y  +  +       D TLFP V K+C+ L  +
Sbjct: 22  LSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYI 81

Query: 173 KEGTSFHACVIKQGLKPYTSIGNSIINFYMKCG 271
            +G   HAC+IK     +TSIGNSI+NFY+KCG
Sbjct: 82  -DGKCLHACLIKTAFDSFTSIGNSILNFYIKCG 113


>ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = +2

Query: 5   NILSASKLHNLKQKMKESSFQGHWQNVLTHYLGLKKS----EDPTLFPHVFKSCANLHCL 172
           N  +  +L +L  K+K++S+ G+WQ  L  Y  ++ S     D  + P + K+C+N    
Sbjct: 5   NFQAGLRLSDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTS-F 63

Query: 173 KEGTSFHACVIKQGLKPYTSIGNSIINFYMKCG 271
             GT+ H C+IKQG +  TSI NS I+FYMK G
Sbjct: 64  NLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYG 96