BLASTX nr result

ID: Coptis25_contig00039853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039853
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|2235...   248   4e-64
ref|XP_002314124.1| predicted protein [Populus trichocarpa] gi|2...   245   2e-63
ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
gb|AAC49536.1| diphenol oxidase [Nicotiana tabacum]                   241   6e-62
ref|XP_002308208.1| laccase 1c [Populus trichocarpa] gi|22285418...   238   3e-61

>ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|223540267|gb|EEF41838.1|
           laccase, putative [Ricinus communis]
          Length = 556

 Score =  248 bits (633), Expect = 4e-64
 Identities = 109/132 (82%), Positives = 121/132 (91%)
 Frame = +3

Query: 3   EMEKWARVLVLVICLSPAMVECMVRQYKFNIVMKNTTRLCATKPIVTVNGKFPGPTLVAR 182
           E+  W RVLVLV CL PA VECMVR YKFN+VMK  T++C+TKPIVTVNGKFPGPTLVAR
Sbjct: 2   EIAPWVRVLVLVACLFPASVECMVRHYKFNVVMKTATKMCSTKPIVTVNGKFPGPTLVAR 61

Query: 183 EGDTVLVKVANHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGQNFIYNFTITGQRG 362
           E DTVLVKV NHVKYN+SIHWHGIRQ+RTGWADGPAYITQCPI+PGQ+++YNFT+TGQRG
Sbjct: 62  EDDTVLVKVVNHVKYNLSIHWHGIRQVRTGWADGPAYITQCPIQPGQSYVYNFTLTGQRG 121

Query: 363 TLWWHAHILWLR 398
           TLWWHAHILWLR
Sbjct: 122 TLWWHAHILWLR 133


>ref|XP_002314124.1| predicted protein [Populus trichocarpa] gi|222850532|gb|EEE88079.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  245 bits (626), Expect = 2e-63
 Identities = 112/132 (84%), Positives = 121/132 (91%)
 Frame = +3

Query: 3   EMEKWARVLVLVICLSPAMVECMVRQYKFNIVMKNTTRLCATKPIVTVNGKFPGPTLVAR 182
           +M  W RVLVLV CL PA VE MVR YKFN+VMKN+T+LC+TKPIVTVNG+FPGPTLVAR
Sbjct: 2   DMAPWIRVLVLVACLFPASVESMVRHYKFNVVMKNSTKLCSTKPIVTVNGQFPGPTLVAR 61

Query: 183 EGDTVLVKVANHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGQNFIYNFTITGQRG 362
           E DTVLVKV NHVKYNVSIHWHGIRQLRTGWADGPAYITQCPI+PGQ+F+YNFTITGQRG
Sbjct: 62  EDDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQSFVYNFTITGQRG 121

Query: 363 TLWWHAHILWLR 398
           TL WHAHILWLR
Sbjct: 122 TLLWHAHILWLR 133


>ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|222847086|gb|EEE84633.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  243 bits (619), Expect = 2e-62
 Identities = 111/131 (84%), Positives = 119/131 (90%)
 Frame = +3

Query: 6   MEKWARVLVLVICLSPAMVECMVRQYKFNIVMKNTTRLCATKPIVTVNGKFPGPTLVARE 185
           M  W RVLVLV CL PA VE MVR YKFN+VMKNTTRLC+ KPIVTVNG+FPGPTLVARE
Sbjct: 1   MALWLRVLVLVACLFPASVESMVRHYKFNVVMKNTTRLCSEKPIVTVNGRFPGPTLVARE 60

Query: 186 GDTVLVKVANHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGQNFIYNFTITGQRGT 365
            DTVLVKV NHVKYNVSIHWHGIRQLRTGWADGPAYITQCP++PGQ+F+YNFTI+GQRGT
Sbjct: 61  DDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPLQPGQSFVYNFTISGQRGT 120

Query: 366 LWWHAHILWLR 398
           L WHAHILWLR
Sbjct: 121 LLWHAHILWLR 131


>gb|AAC49536.1| diphenol oxidase [Nicotiana tabacum]
          Length = 557

 Score =  241 bits (614), Expect = 6e-62
 Identities = 107/132 (81%), Positives = 120/132 (90%), Gaps = 1/132 (0%)
 Frame = +3

Query: 6   MEKWARV-LVLVICLSPAMVECMVRQYKFNIVMKNTTRLCATKPIVTVNGKFPGPTLVAR 182
           M  W R+ +VL  CL P +VEC +R YKFN+VMKNTTRLC++KPIVTVNGKFPGPT+ AR
Sbjct: 1   MNSWIRLFIVLAACLFPLVVECRIRHYKFNVVMKNTTRLCSSKPIVTVNGKFPGPTIYAR 60

Query: 183 EGDTVLVKVANHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGQNFIYNFTITGQRG 362
           EGDTVLVKV NHVKYN+SIHWHGIRQLRTGWADGPAYITQCPI+PGQN++YNFTITGQRG
Sbjct: 61  EGDTVLVKVVNHVKYNLSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYVYNFTITGQRG 120

Query: 363 TLWWHAHILWLR 398
           TL+WHAHILWLR
Sbjct: 121 TLFWHAHILWLR 132


>ref|XP_002308208.1| laccase 1c [Populus trichocarpa] gi|222854184|gb|EEE91731.1|
           laccase 1c [Populus trichocarpa]
          Length = 560

 Score =  238 bits (608), Expect = 3e-61
 Identities = 105/128 (82%), Positives = 117/128 (91%)
 Frame = +3

Query: 15  WARVLVLVICLSPAMVECMVRQYKFNIVMKNTTRLCATKPIVTVNGKFPGPTLVAREGDT 194
           W R ++L +CL PA+V+C VR YKFN+VMKNTTRLC+ KPIVTVNG+FPGPTL ARE DT
Sbjct: 6   WLRFMLLAVCLFPALVQCRVRHYKFNVVMKNTTRLCSRKPIVTVNGRFPGPTLYAREHDT 65

Query: 195 VLVKVANHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGQNFIYNFTITGQRGTLWW 374
           VLVKV NHVKYNVSIHWHGIRQLRTGWADGPAYITQCPI+PGQ+++YNFTITGQRGTL W
Sbjct: 66  VLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLLW 125

Query: 375 HAHILWLR 398
           HAHILWLR
Sbjct: 126 HAHILWLR 133


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