BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039824
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...   223   1e-56
ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi...   221   4e-56
emb|CBI29027.3| unnamed protein product [Vitis vinifera]              218   5e-55
ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi...   218   5e-55
emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]   218   5e-55

>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score =  223 bits (568), Expect = 1e-56
 Identities = 99/153 (64%), Positives = 129/153 (84%)
 Frame = -2

Query: 463 LFREMQKLKVTPDEITYLSLLSACAHGGLVQEAWYFFNSLSRHGMTPMLEHSACMVDVLS 284
           LF EM+ + + PDEITYL LLS CAHGGLV+EAWYFF+ L +HGM P +EH ACMVD LS
Sbjct: 335 LFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLRKHGMIPKVEHYACMVDALS 394

Query: 283 RAGYLDEAFEFLNKMPVEPTASMLGALLSGCVSHGRLDIGEIVGRKLVELEPENDGRYIG 104
           RAG + EA++FL +MPV+PT+SMLGALLSGC+ HG+LDI ++VGR+LVEL+P +DGRY+G
Sbjct: 395 RAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVG 454

Query: 103 LANVYSIARRWEDTKTLRKTMEKRGVKKSPGCS 5
           L+N+Y+  +RW+D K +R+ ME++GVKKSPG S
Sbjct: 455 LSNIYAADKRWDDAKNIREAMERKGVKKSPGFS 487


>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Glycine max]
          Length = 548

 Score =  221 bits (564), Expect = 4e-56
 Identities = 101/153 (66%), Positives = 130/153 (84%)
 Frame = -2

Query: 463 LFREMQKLKVTPDEITYLSLLSACAHGGLVQEAWYFFNSLSRHGMTPMLEHSACMVDVLS 284
           LF+EMQ + + PDE+TYL LL+ACAHGGLV+EAW+FF SLS+ GMTP  EH ACMVDVL+
Sbjct: 336 LFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFFFESLSKCGMTPTSEHYACMVDVLA 395

Query: 283 RAGYLDEAFEFLNKMPVEPTASMLGALLSGCVSHGRLDIGEIVGRKLVELEPENDGRYIG 104
           RAG L  A++F+ +MP EPTASMLGALLSGC++H  L + EIVGRKL+ELEP +DGRYIG
Sbjct: 396 RAGQLTTAYQFICQMPTEPTASMLGALLSGCINHRNLALAEIVGRKLIELEPNHDGRYIG 455

Query: 103 LANVYSIARRWEDTKTLRKTMEKRGVKKSPGCS 5
           L+N+Y++ +RW+D +++R+ ME+RGVKKSPG S
Sbjct: 456 LSNMYAVDKRWDDARSMREAMERRGVKKSPGFS 488


>emb|CBI29027.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/153 (66%), Positives = 126/153 (82%)
 Frame = -2

Query: 463 LFREMQKLKVTPDEITYLSLLSACAHGGLVQEAWYFFNSLSRHGMTPMLEHSACMVDVLS 284
           LF+EMQ L + PDEITYL L SACAHGGLV EAW+FF SL + GM P  EH ACMVDVLS
Sbjct: 179 LFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMVPKSEHYACMVDVLS 238

Query: 283 RAGYLDEAFEFLNKMPVEPTASMLGALLSGCVSHGRLDIGEIVGRKLVELEPENDGRYIG 104
           RAG L EA++F+ +MP+EPTASMLGALL+GC++H R D+ E VGRKL+ELEP++DGRYIG
Sbjct: 239 RAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIG 298

Query: 103 LANVYSIARRWEDTKTLRKTMEKRGVKKSPGCS 5
           L+NVY+  + W++ + +R+ ME+RGVKKSPG S
Sbjct: 299 LSNVYAGVKLWDNARMMREAMERRGVKKSPGFS 331


>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Vitis vinifera]
          Length = 539

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/153 (66%), Positives = 126/153 (82%)
 Frame = -2

Query: 463 LFREMQKLKVTPDEITYLSLLSACAHGGLVQEAWYFFNSLSRHGMTPMLEHSACMVDVLS 284
           LF+EMQ L + PDEITYL L SACAHGGLV EAW+FF SL + GM P  EH ACMVDVLS
Sbjct: 334 LFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMVPKSEHYACMVDVLS 393

Query: 283 RAGYLDEAFEFLNKMPVEPTASMLGALLSGCVSHGRLDIGEIVGRKLVELEPENDGRYIG 104
           RAG L EA++F+ +MP+EPTASMLGALL+GC++H R D+ E VGRKL+ELEP++DGRYIG
Sbjct: 394 RAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIG 453

Query: 103 LANVYSIARRWEDTKTLRKTMEKRGVKKSPGCS 5
           L+NVY+  + W++ + +R+ ME+RGVKKSPG S
Sbjct: 454 LSNVYAGVKLWDNARMMREAMERRGVKKSPGFS 486


>emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
          Length = 532

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/153 (66%), Positives = 126/153 (82%)
 Frame = -2

Query: 463 LFREMQKLKVTPDEITYLSLLSACAHGGLVQEAWYFFNSLSRHGMTPMLEHSACMVDVLS 284
           LF+EMQ L + PDEITYL L SACAHGGLV EAW+FF SL + GM P  EH ACMVDVLS
Sbjct: 327 LFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMVPKSEHYACMVDVLS 386

Query: 283 RAGYLDEAFEFLNKMPVEPTASMLGALLSGCVSHGRLDIGEIVGRKLVELEPENDGRYIG 104
           RAG L EA++F+ +MP+EPTASMLGALL+GC++H R D+ E VGRKL+ELEP++DGRYIG
Sbjct: 387 RAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIG 446

Query: 103 LANVYSIARRWEDTKTLRKTMEKRGVKKSPGCS 5
           L+NVY+  + W++ + +R+ ME+RGVKKSPG S
Sbjct: 447 LSNVYAGVKLWDNARMMREAMERRGVKKSPGFS 479