BLASTX nr result

ID: Coptis25_contig00039812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039812
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36156.3| unnamed protein product [Vitis vinifera]              313   2e-83
ref|XP_002528200.1| regulator of telomere elongation helicase 1 ...   309   3e-82
ref|XP_004141849.1| PREDICTED: regulator of telomere elongation ...   308   6e-82
ref|XP_002279773.2| PREDICTED: regulator of telomere elongation ...   306   1e-81
ref|XP_002298143.1| predicted protein [Populus trichocarpa] gi|2...   301   4e-80

>emb|CBI36156.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  313 bits (801), Expect = 2e-83
 Identities = 148/194 (76%), Positives = 165/194 (85%)
 Frame = +1

Query: 4    NFARIVPDGLLVFFPSYYLLDQCIACWKNLSQDSSTNTSTIWERICKHKQPVVEPKQSSL 183
            NFARIVPDGLLVFFPSYY+L+QC+ CWKN S  +STN+STIWERICKHKQPV+EP+QSSL
Sbjct: 547  NFARIVPDGLLVFFPSYYILEQCVGCWKNKSHANSTNSSTIWERICKHKQPVIEPRQSSL 606

Query: 184  FSSSIEDYMTKLSDISTSGAVFFAVCRGKVSEGLDFADHTGRAVVITGMPFPTWNDPKVR 363
            F SSIEDYM KL D S SGAVFFAVCRGKVSEGLDFADH GRAVVITG+PF    DPKVR
Sbjct: 607  FPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEGLDFADHAGRAVVITGIPFAMRTDPKVR 666

Query: 364  LKRDFLDHPSDSPKKELKALTGGEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCNERFSH 543
            LKR+FLD    S K+  K LTG EWY QQASRAVNQAVGRVIRH HD+GAIIFC+ERF+H
Sbjct: 667  LKREFLDQRGLSQKEGCKVLTGEEWYTQQASRAVNQAVGRVIRHCHDFGAIIFCDERFAH 726

Query: 544  AKNQHQMSIWLQPY 585
               Q Q+S+W+QP+
Sbjct: 727  PNRQSQISLWIQPH 740


>ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative [Ricinus
            communis] gi|223532412|gb|EEF34207.1| regulator of
            telomere elongation helicase 1 rtel1, putative [Ricinus
            communis]
          Length = 1049

 Score =  309 bits (791), Expect = 3e-82
 Identities = 152/198 (76%), Positives = 169/198 (85%), Gaps = 4/198 (2%)
 Frame = +1

Query: 4    NFARIVPDGLLVFFPSYYLLDQCIACWKNLSQDSSTNTSTIWERICKHKQPVVEPKQSSL 183
            NFARIVPDGLLVFFPSYYLLDQCI CWKN++  SST   TIWERICKHKQPVVEP+QSSL
Sbjct: 510  NFARIVPDGLLVFFPSYYLLDQCIGCWKNVTHASST---TIWERICKHKQPVVEPRQSSL 566

Query: 184  FSSSIEDYMTKLSDISTSGAVFFAVCRGKVSEGLDFADHTGRAVVITGMPFPTWNDPKVR 363
            F  +IEDYM KL D STSGAVFFAVCRGKVSEGLDFADHTGRAV+I GMPFP+ NDPKVR
Sbjct: 567  FPLAIEDYMAKLKDTSTSGAVFFAVCRGKVSEGLDFADHTGRAVMIIGMPFPSRNDPKVR 626

Query: 364  LKRDFLDH----PSDSPKKELKALTGGEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCNE 531
            LKR+FLD       D+ K +L  LTG  WY QQASRAVNQAVGRVIRHRHDYGAIIFC+E
Sbjct: 627  LKREFLDEQLCLQRDAYKSQL--LTGESWYTQQASRAVNQAVGRVIRHRHDYGAIIFCDE 684

Query: 532  RFSHAKNQHQMSIWLQPY 585
            RF+H+ +Q Q+S+W+QP+
Sbjct: 685  RFAHSNSQSQISLWIQPH 702


>ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like [Cucumis
            sativus]
          Length = 1054

 Score =  308 bits (788), Expect = 6e-82
 Identities = 146/194 (75%), Positives = 165/194 (85%)
 Frame = +1

Query: 4    NFARIVPDGLLVFFPSYYLLDQCIACWKNLSQDSSTNTSTIWERICKHKQPVVEPKQSSL 183
            NFARIVPDGLLVFFPSYY LDQCI+CWKN S  SST   TIWERI KHK+PV+EP+QSSL
Sbjct: 509  NFARIVPDGLLVFFPSYYFLDQCISCWKNQSLSSST---TIWERISKHKKPVIEPRQSSL 565

Query: 184  FSSSIEDYMTKLSDISTSGAVFFAVCRGKVSEGLDFADHTGRAVVITGMPFPTWNDPKVR 363
            F SSIEDYM KL D S+SGAVFFAVCRGKVSEGLDFADH GRAV+ITGMPF + NDPKVR
Sbjct: 566  FPSSIEDYMFKLEDTSSSGAVFFAVCRGKVSEGLDFADHAGRAVIITGMPFASRNDPKVR 625

Query: 364  LKRDFLDHPSDSPKKELKALTGGEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCNERFSH 543
            LKR +LDH S S +   + +TG +WY QQA RAVNQAVGRVIRHRHDYGAIIFC+ERF+H
Sbjct: 626  LKRGYLDHQSQSQRGNCQIMTGEDWYTQQAMRAVNQAVGRVIRHRHDYGAIIFCDERFAH 685

Query: 544  AKNQHQMSIWLQPY 585
            +  Q Q+S+W+QP+
Sbjct: 686  SSRQSQISVWIQPH 699


>ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like [Vitis
            vinifera]
          Length = 1084

 Score =  306 bits (785), Expect = 1e-81
 Identities = 147/199 (73%), Positives = 166/199 (83%), Gaps = 5/199 (2%)
 Frame = +1

Query: 4    NFARIVPDGLLVFFPSYYLLDQCIACWKNLSQDSSTNTSTIWERICKHKQPVVEPKQSSL 183
            NFARIVPDGLLVFFPSYY+L+QC+ CWKN S  +STN+STIWERICKHKQPV+EP+QSSL
Sbjct: 516  NFARIVPDGLLVFFPSYYILEQCVGCWKNKSHANSTNSSTIWERICKHKQPVIEPRQSSL 575

Query: 184  FSSSIEDYMTKLSDISTSGAVFFAVCRGKVSEGLDFADHTGRAVVITGMPFPTWNDPKVR 363
            F SSIEDYM KL D S SGAVFFAVCRGKVSEGLDFADH GRAVVITG+PF    DPKVR
Sbjct: 576  FPSSIEDYMNKLKDSSMSGAVFFAVCRGKVSEGLDFADHAGRAVVITGIPFAMRTDPKVR 635

Query: 364  LKRDFLDHPSDSPKK-----ELKALTGGEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCN 528
            LKR+FLD    S K+      ++ LTG EWY QQASRAVNQAVGRVIRH HD+GAIIFC+
Sbjct: 636  LKREFLDQRGLSQKEGCKTLPIQVLTGEEWYTQQASRAVNQAVGRVIRHCHDFGAIIFCD 695

Query: 529  ERFSHAKNQHQMSIWLQPY 585
            ERF+H   Q Q+S+W+QP+
Sbjct: 696  ERFAHPNRQSQISLWIQPH 714


>ref|XP_002298143.1| predicted protein [Populus trichocarpa] gi|222845401|gb|EEE82948.1|
            predicted protein [Populus trichocarpa]
          Length = 749

 Score =  301 bits (772), Expect = 4e-80
 Identities = 147/199 (73%), Positives = 167/199 (83%), Gaps = 5/199 (2%)
 Frame = +1

Query: 4    NFARIVPDGLLVFFPSYYLLDQCIACWKNLSQDSSTNTSTIWERICKHKQPVVEPKQSSL 183
            NFARIVPDGLLVFFPSYYLLDQCI+CWKN+SQ +ST   TIWERICKHK+PVVEP+QSSL
Sbjct: 507  NFARIVPDGLLVFFPSYYLLDQCISCWKNMSQANST---TIWERICKHKKPVVEPRQSSL 563

Query: 184  FSSSIEDYMTKLSDISTSGAVFFAVCRGKVSEGLDFADHTGRAVVITGMPFPTWNDPKVR 363
            F  +IEDY+ KL D STSGAVFFAVCRGKVSEGLDFADH GRAVVITGMPF    DPKVR
Sbjct: 564  FPLAIEDYLAKLKDTSTSGAVFFAVCRGKVSEGLDFADHAGRAVVITGMPFAMRTDPKVR 623

Query: 364  LKRDFLDHPSDSPKK-----ELKALTGGEWYNQQASRAVNQAVGRVIRHRHDYGAIIFCN 528
            LKR++LD  + S +      +L+ L+G EWY QQASRAVNQAVGRVIRHR+DYGAIIFC+
Sbjct: 624  LKREYLDGQTHSQRDGCKMLKLQVLSGEEWYGQQASRAVNQAVGRVIRHRYDYGAIIFCD 683

Query: 529  ERFSHAKNQHQMSIWLQPY 585
            ERF H   Q Q+S+W+QP+
Sbjct: 684  ERFEHRNRQTQISLWIQPH 702


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