BLASTX nr result

ID: Coptis25_contig00039803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039803
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284643.2| PREDICTED: peptidyl-prolyl cis-trans isomera...   394   e-107
emb|CBI20353.3| unnamed protein product [Vitis vinifera]              394   e-107
ref|XP_002329154.1| predicted protein [Populus trichocarpa] gi|2...   388   e-105
ref|XP_002530189.1| peptidyl-prolyl cis-trans isomerase, putativ...   382   e-103
ref|XP_004149289.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   368   1e-99

>ref|XP_002284643.2| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic
            [Vitis vinifera]
          Length = 400

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/259 (76%), Positives = 229/259 (88%), Gaps = 1/259 (0%)
 Frame = +2

Query: 251  HGMKSVKSAISIALIFMQVSVPLPLTGWNHSLFISPATAVLYSPDTKVPRTGELALRKAI 430
            HG++ V+S I+  LIF+Q+S PLP+  W+ S+ ISPA AVLYSPDTKVPRTGELALRKAI
Sbjct: 21   HGLRKVESIIAAILIFVQISSPLPIVAWD-SMSISPAKAVLYSPDTKVPRTGELALRKAI 79

Query: 431  PANTNMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKALKIAKDEKESILSSVPADQRDK 610
            PANTNMKAIQDSLE+ISYLLRIPQRKPYGTMEGNVKK+LKIA DEKESIL+++P D ++K
Sbjct: 80   PANTNMKAIQDSLEEISYLLRIPQRKPYGTMEGNVKKSLKIAMDEKESILATLPPDLKEK 139

Query: 611  GTILYTSLIDGKGGLQSLLDYIKDKDADRVSTGLASSLDTIAELELLQAPGLSFLLPEQY 790
            G+ LY SLIDGKGGLQ+LL  +KDKD D+VS GLASSLDT+AELELLQAPGLSFLLPEQY
Sbjct: 140  GSTLYASLIDGKGGLQALLQCVKDKDPDKVSVGLASSLDTVAELELLQAPGLSFLLPEQY 199

Query: 791  LKYPRLTGRGTVEFTIEKGDGSTFSP-VSGKSKSQAVIQVVIDGYSTPLTAGNFAKLVVD 967
            LKYPRL GRG +EFTIEKGDGS+FSP   G+S+  A IQVVIDGYSTPLT+GNFAKLV+D
Sbjct: 200  LKYPRLVGRGIIEFTIEKGDGSSFSPEAGGESRKTATIQVVIDGYSTPLTSGNFAKLVID 259

Query: 968  GAYDGVKLKVTDQAVLSDS 1024
            GAYDG KL + +QA+LSD+
Sbjct: 260  GAYDGAKLNLINQAILSDN 278


>emb|CBI20353.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/259 (76%), Positives = 229/259 (88%), Gaps = 1/259 (0%)
 Frame = +2

Query: 251  HGMKSVKSAISIALIFMQVSVPLPLTGWNHSLFISPATAVLYSPDTKVPRTGELALRKAI 430
            HG++ V+S I+  LIF+Q+S PLP+  W+ S+ ISPA AVLYSPDTKVPRTGELALRKAI
Sbjct: 73   HGLRKVESIIAAILIFVQISSPLPIVAWD-SMSISPAKAVLYSPDTKVPRTGELALRKAI 131

Query: 431  PANTNMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKALKIAKDEKESILSSVPADQRDK 610
            PANTNMKAIQDSLE+ISYLLRIPQRKPYGTMEGNVKK+LKIA DEKESIL+++P D ++K
Sbjct: 132  PANTNMKAIQDSLEEISYLLRIPQRKPYGTMEGNVKKSLKIAMDEKESILATLPPDLKEK 191

Query: 611  GTILYTSLIDGKGGLQSLLDYIKDKDADRVSTGLASSLDTIAELELLQAPGLSFLLPEQY 790
            G+ LY SLIDGKGGLQ+LL  +KDKD D+VS GLASSLDT+AELELLQAPGLSFLLPEQY
Sbjct: 192  GSTLYASLIDGKGGLQALLQCVKDKDPDKVSVGLASSLDTVAELELLQAPGLSFLLPEQY 251

Query: 791  LKYPRLTGRGTVEFTIEKGDGSTFSP-VSGKSKSQAVIQVVIDGYSTPLTAGNFAKLVVD 967
            LKYPRL GRG +EFTIEKGDGS+FSP   G+S+  A IQVVIDGYSTPLT+GNFAKLV+D
Sbjct: 252  LKYPRLVGRGIIEFTIEKGDGSSFSPEAGGESRKTATIQVVIDGYSTPLTSGNFAKLVID 311

Query: 968  GAYDGVKLKVTDQAVLSDS 1024
            GAYDG KL + +QA+LSD+
Sbjct: 312  GAYDGAKLNLINQAILSDN 330


>ref|XP_002329154.1| predicted protein [Populus trichocarpa] gi|222869823|gb|EEF06954.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  388 bits (997), Expect = e-105
 Identities = 200/264 (75%), Positives = 227/264 (85%), Gaps = 1/264 (0%)
 Frame = +2

Query: 236  LSMMCHGMKSVKSAISIALIFMQVSVPLPLTGWNHSLFISPATAVLYSPDTKVPRTGELA 415
            +S    G K +KS I++ LIF+Q+S P+PL+GW+   ++SPA AVLYSPDTKVPRTGELA
Sbjct: 1    MSTFGDGTKKLKSLIAMILIFIQISAPVPLSGWDF-WYVSPAKAVLYSPDTKVPRTGELA 59

Query: 416  LRKAIPANTNMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKALKIAKDEKESILSSVPA 595
            LRKAIPAN NMK+IQ SLEDISYLLRIPQRKPYGTMEGNVKKALKIAKDEK+SIL+S+P 
Sbjct: 60   LRKAIPANINMKSIQTSLEDISYLLRIPQRKPYGTMEGNVKKALKIAKDEKDSILASLPE 119

Query: 596  DQRDKGTILYTSLIDGKGGLQSLLDYIKDKDADRVSTGLASSLDTIAELELLQAPGLSFL 775
            D ++KG+ LY SLIDGKGGLQ+LL  IKD+D DRVS GLASSLD +AELELLQAPGLSFL
Sbjct: 120  DLKEKGSTLYASLIDGKGGLQALLQCIKDQDPDRVSVGLASSLDAVAELELLQAPGLSFL 179

Query: 776  LPEQYLKYPRLTGRGTVEFTIEKGDGSTFSP-VSGKSKSQAVIQVVIDGYSTPLTAGNFA 952
            LP+QYLKYPRLTGRGTVEFTIEK DGSTFSP   G+ K  A IQVVIDG+S PLTAGNF 
Sbjct: 180  LPQQYLKYPRLTGRGTVEFTIEKVDGSTFSPEAGGEPKKNAKIQVVIDGFSAPLTAGNFV 239

Query: 953  KLVVDGAYDGVKLKVTDQAVLSDS 1024
            KLVVDGAY+G KL  TDQAVL+D+
Sbjct: 240  KLVVDGAYNGAKLSFTDQAVLTDN 263


>ref|XP_002530189.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
            gi|223530308|gb|EEF32203.1| peptidyl-prolyl cis-trans
            isomerase, putative [Ricinus communis]
          Length = 403

 Score =  382 bits (980), Expect = e-103
 Identities = 194/262 (74%), Positives = 225/262 (85%), Gaps = 4/262 (1%)
 Frame = +2

Query: 251  HGMKSVKSAISIALIFMQVSVPLPLTG---WNHSLFISPATAVLYSPDTKVPRTGELALR 421
            HG K ++S I++ LIF+Q+S PLPL G   W+    +SPA AVLYSPDTKVPRTGELALR
Sbjct: 21   HGTKKLESLIAVILIFVQISSPLPLVGLDFWS----VSPAEAVLYSPDTKVPRTGELALR 76

Query: 422  KAIPANTNMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKALKIAKDEKESILSSVPADQ 601
            +AIPANTNMKAIQ+SLEDIS+LLRIPQRKPYGTMEGNVKKALKIAKDEK+SIL+S+PAD 
Sbjct: 77   RAIPANTNMKAIQNSLEDISFLLRIPQRKPYGTMEGNVKKALKIAKDEKDSILASIPADL 136

Query: 602  RDKGTILYTSLIDGKGGLQSLLDYIKDKDADRVSTGLASSLDTIAELELLQAPGLSFLLP 781
            ++KG+ LY SLIDGKGGLQ+L+  IK++D D+VS GLASSLDT+AELELLQAPGL FLLP
Sbjct: 137  KEKGSALYASLIDGKGGLQALIQCIKEQDPDKVSVGLASSLDTVAELELLQAPGLQFLLP 196

Query: 782  EQYLKYPRLTGRGTVEFTIEKGDGSTFSP-VSGKSKSQAVIQVVIDGYSTPLTAGNFAKL 958
            +QYLKYPRLTGRGTVEFT+EK DGSTF+P   G+ +  A IQVV+DGYS PLT GNFAKL
Sbjct: 197  QQYLKYPRLTGRGTVEFTVEKADGSTFTPEAGGEERKTAKIQVVLDGYSAPLTTGNFAKL 256

Query: 959  VVDGAYDGVKLKVTDQAVLSDS 1024
            VVDGAYDG K+  TDQAV+  S
Sbjct: 257  VVDGAYDGAKISCTDQAVIIGS 278


>ref|XP_004149289.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37,
            chloroplastic-like [Cucumis sativus]
            gi|449521535|ref|XP_004167785.1| PREDICTED:
            peptidyl-prolyl cis-trans isomerase CYP37,
            chloroplastic-like [Cucumis sativus]
          Length = 459

 Score =  368 bits (945), Expect = 1e-99
 Identities = 186/258 (72%), Positives = 218/258 (84%), Gaps = 1/258 (0%)
 Frame = +2

Query: 254  GMKSVKSAISIALIFMQVSVPLPLTGWNHSLFISPATAVLYSPDTKVPRTGELALRKAIP 433
            G + ++  I++ LI +Q+S PLPL  W+    I PA AVLYSPDTKVPRTGELALR+AIP
Sbjct: 78   GKREIRKLIAVLLICIQISSPLPLLNWDFQS-IHPAMAVLYSPDTKVPRTGELALRRAIP 136

Query: 434  ANTNMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKALKIAKDEKESILSSVPADQRDKG 613
            ANT+MKAIQDSLE+ISYLLRIPQRKPYGTMEGNVKKALK+A DEK+ IL S+P++ ++KG
Sbjct: 137  ANTSMKAIQDSLEEISYLLRIPQRKPYGTMEGNVKKALKLAVDEKDLILGSIPSESKEKG 196

Query: 614  TILYTSLIDGKGGLQSLLDYIKDKDADRVSTGLASSLDTIAELELLQAPGLSFLLPEQYL 793
              +YT+LI+GKGGLQ+LL  IKD D D+VS GLASSLDT+AELELLQAPGLSFLLP QY 
Sbjct: 197  LAIYTTLIEGKGGLQTLLQSIKDNDPDKVSVGLASSLDTVAELELLQAPGLSFLLPAQYS 256

Query: 794  KYPRLTGRGTVEFTIEKGDGSTFSP-VSGKSKSQAVIQVVIDGYSTPLTAGNFAKLVVDG 970
            KYPRLTGRG VEFTI+KGDGS+FSP   G+S S A IQVV+DGYS PLTAGNFAKLV+DG
Sbjct: 257  KYPRLTGRGIVEFTIQKGDGSSFSPQAGGESSSTATIQVVVDGYSAPLTAGNFAKLVIDG 316

Query: 971  AYDGVKLKVTDQAVLSDS 1024
            AYDG KL  T QA+LS++
Sbjct: 317  AYDGSKLSSTSQAILSEN 334


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